Skip to content

Enhacements in polish module

Compare
Choose a tag to compare
@GwennyGit GwennyGit released this 09 Aug 15:11
· 647 commits to main since this release
345324e

With this release, the polish module is now connected to the API of bioregistry.io.

New additions to the polish module:

  • Check for invalid CURIEs with bioregistry
  • Addition of MIRIAM compliant URIs/IRIs with bioregistry
  • Invalid URIs & CURIEs are reported back with file(s) for better manual curation
  • NaN identifiers are removed, reported with invalid URIs & CURIEs and removed
  • If 'id_db' is set to 'VMH' the BiGG identifiers retrieved from the VMH ones are checked for validity