add repos param

d3b-center · Oct 7, 2024 · 945c0c7 · 945c0c7
1 parent 5ea6cc1
commit 945c0c7
Showing 1 changed file with 5 additions and 5 deletions.
diff --git a/analyses/data_preparation/00-setup.R b/analyses/data_preparation/00-setup.R
@@ -2,20 +2,20 @@
 
 # CRAN packages
 if (!require("optparse", quietly = TRUE))
-  install.packages("optparse")
+  install.packages("optparse", repos = "http://cran.us.r-project.org")
 
 if (!require("tidyverse", quietly = TRUE))
-  install.packages("tidyverse")
+  install.packages("tidyverse", repos = "http://cran.us.r-project.org")
 
 if (!require("datawizard", quietly = TRUE))
-  install.packages("datawizard")
+  install.packages("datawizard", repos = "http://cran.us.r-project.org")
 
 if (!require("reshape2", quietly = TRUE))
-  install.packages("reshape2")
+  install.packages("reshape2", repos = "http://cran.us.r-project.org")
 
 # Bioc packages
 if (!require("BiocManager", quietly = TRUE))
-  install.packages("BiocManager")
+  install.packages("BiocManager", repos = "http://cran.us.r-project.org")
 
 if (!require("rtracklayer", quietly = TRUE))
   BiocManager::install("rtracklayer")