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Update ci.yml

Update ci.yml #860

Workflow file for this run

name: CI
on: [push, pull_request]
env:
NUMBA_NUM_THREADS: 1
MPLBACKEND: Agg
PYTEST_ADDOPTS: --color=yes
jobs:
pyflakes:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v4
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v4
with:
python-version: 3.8
- name: pyflakes
run: |
pip install pyflakes
pyflakes magicctapipe
tests:
runs-on: ubuntu-latest
strategy:
matrix:
python-version: [3.8]
ctapipe-version: [v0.12.0]
steps:
- uses: actions/checkout@v4
with:
fetch-depth: 0
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v4
with:
python-version: ${{ matrix.python-version }}
- name: Prepare mamba installation
env:
PYTHON_VERSION: ${{ matrix.python-version }}
run: |
# setup correct python version
sed -i -e "s/- python=.*/- python=$PYTHON_VERSION/g" environment.yml
- name: mamba setup
uses: mamba-org/setup-micromamba@v1
with:
environment-file: environment.yml
environment-name: "ci"
cache-downloads: true
- name: Install dependencies
env:
PYTHON_VERSION: ${{ matrix.python-version }}
CTAPIPE_VERSION: ${{ matrix.ctapipe-version }}
run: |
# we install ctapipe using pip to be able to select any commit, e.g. the current master
pip install pytest-cov "git+https://github.com/cta-observatory/ctapipe@$CTAPIPE_VERSION"
pip install pyflakes
pip install -e .
git describe --tags
#- name: Download test data
# env:
# TEST_DATA_USER: ${{ secrets.test_data_user }}
# TEST_DATA_PASSWORD: ${{ secrets.test_data_password }}
# run: |
# chmod +x ./download_test_data.sh
# ./download_test_data.sh
- name: Tests
env:
MAGIC_CTA_DATA_USER: ${{ secrets.magic_cta_data_user }}
MAGIC_CTA_DATA_PASSWORD: ${{ secrets.magic_cta_data_password }}
run: |
# github actions starts a new shell for each "step", so we need to
# activate our env again
coverage run -m pytest -v
coverage xml
- uses: codecov/codecov-action@v3