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Update pangolin (#1669)
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Automatic runs have been ok. I'll test a couple samples in staging
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danrlu authored Sep 14, 2023
1 parent 2b978f0 commit db026af
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4 changes: 2 additions & 2 deletions src/backend/Dockerfile.pangolin
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Expand Up @@ -41,8 +41,8 @@ RUN apt-get update && apt-get install -y \
# Install Pangolin and PangoLEARN + deps (for ncov)
# The cov-lineages projects aren't available on PyPI, so install via git URLs.
RUN pip3 install snakemake==7.30.1
RUN pip3 install git+https://github.com/cov-lineages/[email protected]
RUN pip3 install git+https://github.com/cov-lineages/pangolin-data.git@v1.21
RUN pip3 install git+https://github.com/cov-lineages/[email protected].1
RUN pip3 install git+https://github.com/cov-lineages/pangolin-data.git@v1.22
RUN pip3 install git+https://github.com/cov-lineages/[email protected]
RUN pip3 install git+https://github.com/cov-lineages/[email protected]

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