Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/cache@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.

-g -O2 -o .libs/extract_fastq extract_fastq.o -L/opt/homebrew/opt/libdeflate/lib -L/opt/homebrew/opt/zstd/lib ../io_lib/.libs/libstaden-read.dylib -lz -lcurl -lm -lpthread -llzma -lbz2 -ldeflate -lzstd libtool: link: clang -Wall -g -O2 -o index_tar index_tar.o -L/opt/homebrew/opt/libdeflate/lib -L/opt/homebrew/opt/zstd/lib -llzma -lbz2 -ldeflate -lzstd /bin/sh ../libtool --tag=CC --mode=link clang -Wall -g -O2 -L/opt/homebrew/opt/libdeflate/lib -L/opt/homebrew/opt/zstd/lib -o scf_dump scf_dump.o ../io_lib/libstaden-read.la -lzstd -ldeflate -llzma -lbz2 -ldeflate -lzstd /bin/sh ../libtool --tag=CC --mode=link clang -Wall -g -O2 -L/opt/homebrew/opt/libdeflate/lib -L/opt/homebrew/opt/zstd/lib -o scf_info scf_info.o ../io_lib/libstaden-read.la -lzstd -ldeflate -llzma -lbz2 -ldeflate -lzstd /bin/sh ../libtool --tag=CC --mode=link clang -Wall -g -O2 -L/opt/homebrew/opt/libdeflate/lib -L/opt/homebrew/opt/zstd/lib -o scf_update scf_update.o ../io_lib/libstaden-read.la -lzstd -ldeflate -llzma -lbz2 -ldeflate -lzstd libtool: link: clang -Wall -g -O2 -o .libs/scf_dump scf_dump.o -L/opt/homebrew/opt/libdeflate/lib -L/opt/homebrew/opt/zstd/lib ../io_lib/.libs/libstaden-read.dylib -lz -lcurl -lm -lpthread -llzma -lbz2 -ldeflate -lzstd libtool: link: clang -Wall -g -O2 -o .libs/scf_info scf_info.o -L/opt/homebrew/opt/libdeflate/lib -L/opt/homebrew/opt/zstd/lib ../io_lib/.libs/libstaden-read.dylib -lz -lcurl -lm -lpthread -llzma -lbz2 -ldeflate -lzstd libtool: link: clang -Wall -g -O2 -o .libs/scf_update scf_update.o -L/opt/homebrew/opt/libdeflate/lib -L/opt/homebrew/opt/zstd/lib ../io_lib/.libs/libstaden-read.dylib -lz -lcurl -lm -lpthread -llzma -lbz2 -ldeflate -lzstd /bin/sh ../libtool --tag=CC --mode=link clang -Wall -g -O2 -L/opt/homebrew/opt/libdeflate/lib -L/opt/homebrew/opt/zstd/lib -o get_comment get_comment.o ../io_lib/libstaden-read.la -lzstd -ldeflate -llzma -lbz2 -ldeflate -lzstd /bin/sh ../libtool --tag=CC --mode=link clang -Wall -g -O2 -L/opt/homebrew/opt/libdeflate/lib -L/opt/homebrew/opt/zstd/lib -o hash_tar hash_tar.o ../io_lib/libstaden-read.la -lzstd -ldeflate -llzma -lbz2 -ldeflate -lzstd /bin/sh ../libtool --tag=CC --mode=link clang -Wall -g -O2 -L/opt/homebrew/opt/libdeflate/lib -L/opt/homebrew/opt/zstd/lib -o hash_extract hash_extract.o ../io_lib/libstaden-read.la -lzstd -ldeflate -llzma -lbz2 -ldeflate -lzstd libtool: link: clang -Wall -g -O2 -o .libs/get_comment get_comment.o -L/opt/homebrew/opt/libdeflate/lib -L/opt/homebrew/opt/zstd/lib ../io_lib/.libs/libstaden-read.dylib -lz -lcurl -lm -lpthread -llzma -lbz2 -ldeflate -lzstd libtool: link: clang -Wall -g -O2 -o .libs/hash_tar hash_tar.o -L/opt/homebrew/opt/libdeflate/lib -L/opt/homebrew/opt/zstd/lib ../io_lib/.libs/libstaden-read.dylib -lz -lcurl -lm -lpthread -llzma -lbz2 -ldeflate -lzstd libtool: link: clang -Wall -g -O2 -o .libs/hash_extract hash_extract.o -L/opt/homebrew/opt/libdeflate/lib -L/opt/homebrew/opt/zstd/lib ../io_lib/.libs/libstaden-read.dylib -lz -lcurl -lm -lpthread -llzma -lbz2 -ldeflate -lzstd /bin/sh ../libtool --tag=CC --mode=link clang -Wall -g -O2 -L/opt/homebrew/opt/libdeflate/lib -L/opt/homebrew/opt/zstd/lib -o hash_list hash_list.o ../io_lib/libstaden-read.la -lzstd -ldeflate -llzma -lbz2 -ldeflate -lzstd /bin/sh ../libtool --tag=CC --mode=link clang -Wall -g -O2 -L/opt/homebrew/opt/libdeflate/lib -L/opt/homebrew/opt/zstd/lib -o trace_dump trace_dump.o ../io_lib/libstaden-read.la -lzstd -ldeflate -llzma -lbz2 -ldeflate -lzstd /bin/sh ../libtool --tag=CC --mode=link clang -Wall -g -O2 -L/opt/homebrew/opt/libdeflate/lib -L/opt/homebrew/opt/zstd/lib -o hash_sff hash_sff.o ../io_lib/libstaden-read.la -lzstd -ldeflate -llzma -lbz2 -ldeflate -lzstd libtool: link: clang -Wall -g -O2 -o .libs/hash_list hash_list.o -L/opt/homebrew/opt/libdeflate/lib -L/opt/homebrew/opt/zstd/lib ../io_lib/.libs/libstaden-read.dylib -lz -lcurl -lm -lpthread -llzma -lbz2 -ldeflate -lzstd libtool: link: clang -Wall -g -O2 -o .libs/trace_dump trace_dump.o -L/opt/homebrew/opt/libde

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Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/cache@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.

ct_fastq.o ../io_lib/libstaden-read.la -lzstd -ldeflate -llzma -lbz2 -ldeflate -lzstd /bin/sh ../libtool --tag=CC --mode=link clang -Wall -g -O2 -L/usr/local/opt/libdeflate/lib -L/usr/local/opt/zstd/lib -o index_tar index_tar.o -lzstd -ldeflate -llzma -lbz2 -ldeflate -lzstd /bin/sh ../libtool --tag=CC --mode=link clang -Wall -g -O2 -L/usr/local/opt/libdeflate/lib -L/usr/local/opt/zstd/lib -o scf_dump scf_dump.o ../io_lib/libstaden-read.la -lzstd -ldeflate -llzma -lbz2 -ldeflate -lzstd libtool: link: clang -Wall -g -O2 -o .libs/extract_qual extract_qual.o -L/usr/local/opt/libdeflate/lib -L/usr/local/opt/zstd/lib ../io_lib/.libs/libstaden-read.dylib -lz -lcurl -lm -lpthread -llzma -lbz2 -ldeflate -lzstd libtool: link: clang -Wall -g -O2 -o .libs/extract_fastq extract_fastq.o -L/usr/local/opt/libdeflate/lib -L/usr/local/opt/zstd/lib ../io_lib/.libs/libstaden-read.dylib -lz -lcurl -lm -lpthread -llzma -lbz2 -ldeflate -lzstd libtool: link: clang -Wall -g -O2 -o index_tar index_tar.o -L/usr/local/opt/libdeflate/lib -L/usr/local/opt/zstd/lib -llzma -lbz2 -ldeflate -lzstd /bin/sh ../libtool --tag=CC --mode=link clang -Wall -g -O2 -L/usr/local/opt/libdeflate/lib -L/usr/local/opt/zstd/lib -o scf_info scf_info.o ../io_lib/libstaden-read.la -lzstd -ldeflate -llzma -lbz2 -ldeflate -lzstd libtool: link: clang -Wall -g -O2 -o .libs/scf_dump scf_dump.o -L/usr/local/opt/libdeflate/lib -L/usr/local/opt/zstd/lib ../io_lib/.libs/libstaden-read.dylib -lz -lcurl -lm -lpthread -llzma -lbz2 -ldeflate -lzstd /bin/sh ../libtool --tag=CC --mode=link clang -Wall -g -O2 -L/usr/local/opt/libdeflate/lib -L/usr/local/opt/zstd/lib -o scf_update scf_update.o ../io_lib/libstaden-read.la -lzstd -ldeflate -llzma -lbz2 -ldeflate -lzstd /bin/sh ../libtool --tag=CC --mode=link clang -Wall -g -O2 -L/usr/local/opt/libdeflate/lib -L/usr/local/opt/zstd/lib -o get_comment get_comment.o ../io_lib/libstaden-read.la -lzstd -ldeflate -llzma -lbz2 -ldeflate -lzstd /bin/sh ../libtool --tag=CC --mode=link clang -Wall -g -O2 -L/usr/local/opt/libdeflate/lib -L/usr/local/opt/zstd/lib -o hash_tar hash_tar.o ../io_lib/libstaden-read.la -lzstd -ldeflate -llzma -lbz2 -ldeflate -lzstd libtool: link: clang -Wall -g -O2 -o .libs/scf_info scf_info.o -L/usr/local/opt/libdeflate/lib -L/usr/local/opt/zstd/lib ../io_lib/.libs/libstaden-read.dylib -lz -lcurl -lm -lpthread -llzma -lbz2 -ldeflate -lzstd libtool: link: clang -Wall -g -O2 -o .libs/scf_update scf_update.o -L/usr/local/opt/libdeflate/lib -L/usr/local/opt/zstd/lib ../io_lib/.libs/libstaden-read.dylib -lz -lcurl -lm -lpthread -llzma -lbz2 -ldeflate -lzstd /bin/sh ../libtool --tag=CC --mode=link clang -Wall -g -O2 -L/usr/local/opt/libdeflate/lib -L/usr/local/opt/zstd/lib -o hash_extract hash_extract.o ../io_lib/libstaden-read.la -lzstd -ldeflate -llzma -lbz2 -ldeflate -lzstd libtool: link: clang -Wall -g -O2 -o .libs/get_comment get_comment.o -L/usr/local/opt/libdeflate/lib -L/usr/local/opt/zstd/lib ../io_lib/.libs/libstaden-read.dylib -lz -lcurl -lm -lpthread -llzma -lbz2 -ldeflate -lzstd /bin/sh ../libtool --tag=CC --mode=link clang -Wall -g -O2 -L/usr/local/opt/libdeflate/lib -L/usr/local/opt/zstd/lib -o hash_list hash_list.o ../io_lib/libstaden-read.la -lzstd -ldeflate -llzma -lbz2 -ldeflate -lzstd libtool: link: clang -Wall -g -O2 -o .libs/hash_tar hash_tar.o -L/usr/local/opt/libdeflate/lib -L/usr/local/opt/zstd/lib ../io_lib/.libs/libstaden-read.dylib -lz -lcurl -lm -lpthread -llzma -lbz2 -ldeflate -lzstd /bin/sh ../libtool --tag=CC --mode=link clang -Wall -g -O2 -L/usr/local/opt/libdeflate/lib -L/usr/local/opt/zstd/lib -o trace_dump trace_dump.o ../io_lib/libstaden-read.la -lzstd -ldeflate -llzma -lbz2 -ldeflate -lzstd libtool: link: clang -Wall -g -O2 -o .libs/hash_extract hash_extract.o -L/usr/local/opt/libdeflate/lib -L/usr/local/opt/zstd/lib ../io_lib/.libs/libstaden-read.dylib -lz -lcurl -lm -lpthread -llzma -lbz2 -ldeflate -lzstd /bin/sh ../libtool --tag=CC --mode=link clang -Wall -g -O2 -L/usr/local/opt/libdeflate/lib -L/usr/loc

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