spin up docker

biolink · Nov 29, 2023 · 2ca0702 · 2ca0702
1 parent beda6de
commit 2ca0702
Showing 1 changed file with 7 additions and 0 deletions.
diff --git a/.github/workflows/check-dependencies.yaml b/.github/workflows/check-dependencies.yaml
@@ -46,6 +46,7 @@ jobs:
       - name: Clone KGX and install dev branch of bmt
         run: |
           cd ../
+          pwd
           git clone https://github.com/biolink/kgx.git
           cd kgx
           poetry install  # this will install a different version of hdmf from the current one
@@ -55,17 +56,23 @@ jobs:
 
       - name: Setup Neo4j Docker
         run: |
+          cd ../
+          pwd
+          cd kgx
           docker run --detach --name kgx-neo4j-unit-test -p 8484:7474 -p 8888:7687 --env NEO4J_AUTH=neo4j/test neo4j:4.3.0
           docker run --detach --name kgx-neo4j-integration-test -p 7474:7474 -p 7687:7687 --env NEO4J_AUTH=neo4j/test neo4j:4.3.0
           docker ps -a
+
       - name: Wait
         uses: jakejarvis/wait-action@master
         with:
           time: '45s'
 
       - name: Run kgx tests
         run: |  
+          cd ../
           pwd
+          cd kgx
           poetry run pytest tests/unit/test_source/*.py
           poetry run pytest tests/unit/test_sink/*.py
           poetry run pytest tests/unit/*.py