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fuss with workflows to include an add of kgx with the current bmt #6

fuss with workflows to include an add of kgx with the current bmt

fuss with workflows to include an add of kgx with the current bmt #6

---
name: Check BMT initialization daily
on:
pull_request:
schedule:
- cron: '0 5 * * *' # once per day at midnight ET
workflow_dispatch:
# Allows you to run this workflow manually from the Actions tab
types: trigger-run-check-toolkit-initialization
jobs:
# This workflow contains a single job called "build"
build:
# The type of runner that the job will run on
runs-on: ubuntu-latest
strategy:
matrix:
python: [ "3.9", "3.10" ]
# Steps represent a sequence of tasks that will be executed as part of the job
steps:
# Checks-out your repository under $GITHUB_WORKSPACE, so your job can access it
- uses: actions/checkout@v2
- uses: actions/setup-python@v2
name: setup python environment
with:
python-version: ${{ matrix.python }}
# this step we remove and rebuild the poetry.lock file to ensure that the tests that follow can be run
# with the latest dependencies
- name: Install dependencies
run: |
pip install --upgrade pip
pip install poetry
rm -rf poetry.lock
poetry install
- name: Run tests
run: |
make test
- name: Clone KGX and install dev branch of bmt
run: |
cd ../
git clone https://github.com/biolink/kgx.git
cd kgx
poetry install # this will install a different version of hdmf from the current one
poetry remove bmt
poetry add ../bmt
poetry run make test