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Removed constraint added to fastqc.
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Removed constraint added to fastqc to limit operation to older barnacle
nodes.
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charles-cowart committed Jan 9, 2025
1 parent 4d55b55 commit 99b96b8
Showing 1 changed file with 0 additions and 2 deletions.
2 changes: 0 additions & 2 deletions sequence_processing_pipeline/FastQCJob.py
Original file line number Diff line number Diff line change
Expand Up @@ -278,8 +278,6 @@ def _generate_job_script(self):
lines.append(f"#SBATCH -n {self.nprocs}")
lines.append("#SBATCH --time %d" % self.wall_time_limit)
lines.append(f"#SBATCH --mem {self.jmem}")
lines.append('#SBATCH --constraint="intel"')

lines.append("#SBATCH --array 1-%d%%%d" % (
len(self.commands), self.pool_size))

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