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update quantms-utils=0.0.12
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thermorawfileparser=1.4.5
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ypriverol committed Oct 14, 2024
1 parent 8f6c22f commit 607dd93
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2 changes: 2 additions & 0 deletions CHANGELOG.md
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Expand Up @@ -12,6 +12,8 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
### `Changed`

- [#423](https://github.com/bigbio/quantms/pull/423) Updated OpenMS==3.2.0
- [#423]() Update thermorawfileparser==1.4.5
- [#423]() Update quantms-utils==0.0.12

### `Fixed`

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6 changes: 3 additions & 3 deletions modules/local/thermorawfileparser/main.nf
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Expand Up @@ -4,10 +4,10 @@ process THERMORAWFILEPARSER {
label 'process_single'
label 'error_retry'

conda "conda-forge::mono bioconda::thermorawfileparser=1.4.3"
conda "conda-forge::mono bioconda::thermorawfileparser=1.4.5"
container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ?
'https://depot.galaxyproject.org/singularity/thermorawfileparser:1.4.3--ha8f3691_0' :
'biocontainers/thermorawfileparser:1.4.3--ha8f3691_0' }"
'https://depot.galaxyproject.org/singularity/thermorawfileparser:1.4.5--ha8f3691_0' :
'biocontainers/thermorawfileparser:1.4.5--ha8f3691_0' }"

stageInMode {
if (task.attempt == 1) {
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