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2.1.2
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@benvvalk benvvalk released this 24 Oct 19:15
· 363 commits to master since this release
2.1.2
a30c4bc

This release improves scaffold N50 on human by ~10%, due to implementation of a new --median option for DistanceEst (thanks to @lcoombe!). This release also adds a new --max-cost option for konnector and abyss-sealer that curbs indeterminately long running times, particularly at low k values.

abyss-pe:

  • Use the new DistanceEst --median option as the
    default for the scaffolding stage

Dockerfile:

  • Fix OpenMPI setup

DistanceEst:

  • Added --median option

konnector:

  • Added --max-cost option to bound running time

sealer:

  • Added --max-cost option to bound running time
Assets 3
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