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Bump compat for MCMCChains to v3.0 (#55)
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* Bump compat for MCMCChains

* Bump version number

* Update docs manifest

* Constrain MCMCChains to 3.0 for docs
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@sethaxen
sethaxen authored Feb 25, 2020
1 parent 7bedcb0 commit 2587ff3
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4 changes: 2 additions & 2 deletions Project.toml
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@@ -1,7 +1,7 @@
name = "ArviZ"
uuid = "131c737c-5715-5e2e-ad31-c244f01c1dc7"
authors = ["Seth Axen <[email protected]>"]
version = "0.3.1"
version = "0.3.2"

[deps]
Conda = "8f4d0f93-b110-5947-807f-2305c1781a2d"
Expand All @@ -17,7 +17,7 @@ StatsBase = "2913bbd2-ae8a-5f71-8c99-4fb6c76f3a91"
[compat]
CmdStan = "5.2.3, 6.0"
Conda = "1.0"
MCMCChains = "0.3.15, 0.4.2, 1.0, 2.0"
MCMCChains = "0.3.15, 0.4.2, 1.0, 2.0, 3.0"
MonteCarloMeasurements = "0.6.4, 0.7, 0.8"
NamedTupleTools = "0.11.0, 0.12"
Pandas = "1.3.0"
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119 changes: 33 additions & 86 deletions docs/Manifest.toml
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Expand Up @@ -19,9 +19,9 @@ uuid = "0bf59076-c3b1-5ca4-86bd-e02cd72cde3d"
version = "0.2.7"

[[ArgCheck]]
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version = "1.1.0"
version = "2.0.0"

[[Arpack]]
deps = ["Arpack_jll", "Libdl", "LinearAlgebra"]
Expand All @@ -47,12 +47,6 @@ git-tree-sha1 = "bc779df8d73be70e4e05a63727d3a4dfb4c52b1f"
uuid = "4c555306-a7a7-4459-81d9-ec55ddd5c99a"
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Expand All @@ -63,10 +57,10 @@ version = "0.4.2"
uuid = "2a0f44e3-6c83-55bd-87e4-b1978d98bd5f"

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version = "0.5.0"

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Expand Down Expand Up @@ -98,18 +92,6 @@ git-tree-sha1 = "f81ec2bc1e4cbb95d65e04bd2cf621e1a0d32d06"
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Expand Down Expand Up @@ -156,12 +138,6 @@ git-tree-sha1 = "bfc1187b79289637fa0ef6d4436ebdfe6905cbd6"
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version = "0.4.13"

[[Dates]]
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uuid = "ade2ca70-3891-5945-98fb-dc099432e06a"
Expand Down Expand Up @@ -206,9 +182,9 @@ version = "0.24.5"

[[DynamicHMC]]
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[[EllipsisNotation]]
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Expand All @@ -223,27 +199,28 @@ version = "0.7.0"

[[FillArrays]]
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Expand Down Expand Up @@ -322,18 +299,6 @@ git-tree-sha1 = "8868479ff35ab98588ed0a529a9c2a4f8bda3bd6"
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Expand Down Expand Up @@ -364,18 +329,18 @@ uuid = "37e2e46d-f89d-539d-b4ee-838fcccc9c8e"

[[LogDensityProblems]]
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version = "0.10.1"
version = "0.10.3"

[[Logging]]
uuid = "56ddb016-857b-54e1-b83d-db4d58db5568"

[[MCMCChains]]
deps = ["AbstractMCMC", "AxisArrays", "DataFrames", "Distributions", "LinearAlgebra", "Random", "RecipesBase", "Serialization", "SpecialFunctions", "Statistics", "StatsBase"]
git-tree-sha1 = "921ca164a84fa7b62721aeb1105c114dbc25dd4a"
deps = ["AbstractMCMC", "AxisArrays", "Distributions", "Formatting", "LinearAlgebra", "Random", "RecipesBase", "Requires", "Serialization", "SpecialFunctions", "Statistics", "StatsBase"]
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Expand Down Expand Up @@ -403,9 +368,9 @@ uuid = "a63ad114-7e13-5084-954f-fe012c677804"

[[MonteCarloMeasurements]]
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[[NLSolversBase]]
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Expand Down Expand Up @@ -459,12 +424,6 @@ git-tree-sha1 = "5f303510529486bb02ac4d70da8295da38302194"
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[[Parameters]]
deps = ["OrderedCollections"]
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Expand Down Expand Up @@ -532,12 +491,6 @@ git-tree-sha1 = "ce0780857d129208c4e5a6d722486fb40ce11bf8"
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[[QuadGK]]
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Expand Down Expand Up @@ -637,7 +590,7 @@ version = "0.3.1"

[[Soss]]
deps = ["AdvancedHMC", "DiffResults", "Distributions", "DynamicHMC", "FillArrays", "ForwardDiff", "GeneralizedGenerated", "Graphs", "IterTools", "LazyArrays", "LogDensityProblems", "MLStyle", "MacroTools", "MonteCarloMeasurements", "NamedTupleTools", "Printf", "PyCall", "Random", "RecipesBase", "Reexport", "ResumableFunctions", "ReverseDiff", "SimpleGraphs", "SimplePartitions", "SimplePosets", "SpecialFunctions", "Statistics", "StatsFuns", "SymPy", "TransformVariables"]
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Expand Down Expand Up @@ -665,9 +618,9 @@ uuid = "10745b16-79ce-11e8-11f9-7d13ad32a3b2"

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Expand All @@ -681,37 +634,31 @@ uuid = "4607b0f0-06f3-5cda-b6b1-a6196a1729e9"

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3 changes: 3 additions & 0 deletions docs/Project.toml
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Expand Up @@ -5,3 +5,6 @@ Documenter = "e30172f5-a6a5-5a46-863b-614d45cd2de4"
MCMCChains = "c7f686f2-ff18-58e9-bc7b-31028e88f75d"
NamedTupleTools = "d9ec5142-1e00-5aa0-9d6a-321866360f50"
Soss = "8ce77f84-9b61-11e8-39ff-d17a774bf41c"

[compat]
MCMCChains = "3.0"
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3 changes: 2 additions & 1 deletion docs/src/quickstart.md
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Expand Up @@ -111,12 +111,13 @@ end
param_mod = turing_model(J, y, σ)
sampler = NUTS(nwarmup, 0.8)

rng = Random.MersenneTwister(5130)
turing_chns = psample(
param_mod,
sampler,
nwarmup + nsamples,
nchains;
progress = true,
progress = false,
);
```

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2 comments on commit 2587ff3

@sethaxen
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Registration pull request created: JuliaRegistries/General/10047

After the above pull request is merged, it is recommended that a tag is created on this repository for the registered package version.

This will be done automatically if Julia TagBot is installed, or can be done manually through the github interface, or via:

git tag -a v0.3.2 -m "<description of version>" 2587ff31f12cbec92ddcdcbd269ee159e2e4a3fd
git push origin v0.3.2

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