Fix flipped percent unmapped issue

This was already fixed in 5.0.1 for myco_raw
aofarrel · Aug 25, 2023 · e966304 · e966304
1 parent afbfbd2
commit e966304
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/myco_sra.wdl b/myco_sra.wdl
@@ -271,7 +271,7 @@ workflow myco {
 					allInputIndexes = [vcfs_and_bams.left[1]]
 			}
 
-			if(covstats.percentUnmapped > covstatsQC_max_percent_unmapped) {
+			if(covstats.percentUnmapped < covstatsQC_max_percent_unmapped) {
 				if(covstats.coverage > covstatsQC_minimum_coverage) {
 
 					# make diff files