Scripts for Rice (Oryza Sative) root microbiome time-course analysis.
- /fig1-4 # raw data, R scripts and output PDF figures
- figX/figX.N.R # X is number 1-4, including the reproducable R scripts for each panel in figure
If you use these codes, please cited the paper:
Jingying Zhang#, Na Zhang#, Yong-Xin Liu#, Xiaoning Zhang, Bin Hu, Yuan Qin, Haoran Xu, Hui Wang, Xiaoxuan Guo, Jingmei Qian, Wei Wang, Pengfan Zhang, Tao Jin*, Chengcai Chu* & Yang Bai*. Root microbiota shift in rice correlates with resident time in the field and developmental stage. Science China Life Sciences. 2018, 61: 613-621. doi:10.1007/s11427-018-9284-4
Springer: https://link.springer.com/article/10.1007%2Fs11427-018-9284-4