few typos fixed.

anooplab · Jul 1, 2022 · c6f2cdc · c6f2cdc
1 parent 3b29b42
commit c6f2cdc
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Showing 2 changed files with 3 additions and 3 deletions.
diff --git a/pyar/scan.py b/pyar/scan.py
@@ -18,7 +18,7 @@ def generate_guess_for_bonding(molecule_id, seed, monomer, a, b,
     orientations = []
     fun = partial(ab_dist, a, b, monomer, seed)
     for i in range(number_of_orientations):
-        x = global_opt(funt, my_bounds, args=(a, b, monomer, seed),
+        x = global_opt(fun, my_bounds,
                        polish=True, disp=True, workers=-1)
         print(x.message)
         filename_prefix = "aai_"

diff --git a/pyar/tabu.py b/pyar/tabu.py
@@ -110,13 +110,13 @@ def merge_two_molecules(vector, seed_input, monomer_input,
         while contact:
             tabu_logger.debug("moving by small steps")
             monomer.translate(tiny_steps)
-            contact = check_close_contact(seed_here, monomer_here, distance_scaling)
+            contact = check_close_contact(seed, monomer, distance_scaling)
 
             # step_counter += 1
     else:
         while contact:
             monomer.translate(-1*tiny_steps)
-            contact = check_close_contact(seed_here, monomer_here, distance_scaling)
+            contact = check_close_contact(seed, monomer, distance_scaling)
 
 
     #     lower_distance = np.zeros(3)