-
Notifications
You must be signed in to change notification settings - Fork 0
/
Copy pathpathogen_config.yml
42 lines (32 loc) · 1.72 KB
/
pathogen_config.yml
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
MPXV:
- name: "mpox"
barcodes: "https://raw.githubusercontent.com/andersen-lab/Freyja-barcodes/refs/heads/main/MPX/latest/barcode.csv"
lineageyml: "https://raw.githubusercontent.com/andersen-lab/Freyja-barcodes/refs/heads/main/MPX/latest/mpox_lineages.yml"
H5NX:
- name: "H5Nx"
barcodes: "https://raw.githubusercontent.com/andersen-lab/Freyja-barcodes/refs/heads/main/H5Nx/latest/barcode.csv"
H5NX-cattle:
- name: "H5Nx-cattle"
barcodes: "https://raw.githubusercontent.com/andersen-lab/Freyja-barcodes/refs/heads/main/H5Nx-cattle/latest/barcode.csv"
lineageyml: "https://raw.githubusercontent.com/andersen-lab/Freyja-barcodes/refs/heads/main/H5Nx-cattle/latest/h5nx_cattle_lineages.yml"
H1N1pdm:
- name: "H1N1"
barcodes: "https://raw.githubusercontent.com/andersen-lab/Freyja-barcodes/refs/heads/main/H1N1/latest/barcode.csv"
FLU-B-VIC:
- name: "FLU-B-VIC"
barcodes: "https://raw.githubusercontent.com/andersen-lab/Freyja-barcodes/refs/heads/main/FLU-B-VIC/latest/barcode.csv"
H1N1pdm:
- name: "H1N1"
barcodes: "https://raw.githubusercontent.com/andersen-lab/Freyja-barcodes/refs/heads/main/H1N1/latest/barcode.csv"
MEASLESN450:
- name: "MEASLESN450"
barcodes: "https://raw.githubusercontent.com/andersen-lab/Freyja-barcodes/refs/heads/main/MEASLESN450/latest/barcode.csv"
MEASLES:
- name: "MEASLESwholegenome"
barcodes: "https://raw.githubusercontent.com/andersen-lab/Freyja-barcodes/refs/heads/main/MEASLESgenome/latest/barcode.csv"
RSVa:
- name: "RSVa"
barcodes: "https://raw.githubusercontent.com/andersen-lab/Freyja-barcodes/refs/heads/main/RSVa/latest/barcode.csv"
RSVb:
- name: "RSVb"
barcodes: "https://raw.githubusercontent.com/andersen-lab/Freyja-barcodes/refs/heads/main/RSVb/latest/barcode.csv"