-
Notifications
You must be signed in to change notification settings - Fork 0
Commit
This commit does not belong to any branch on this repository, and may belong to a fork outside of the repository.
- Loading branch information
Showing
46 changed files
with
4,982 additions
and
660 deletions.
There are no files selected for viewing
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -1,6 +1,4 @@ | ||
_bookdown_files | ||
.vscode | ||
pkgdocs_cache | ||
gh-pages | ||
src | ||
SVP_files |
This file was deleted.
Oops, something went wrong.
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -0,0 +1,270 @@ | ||
<!DOCTYPE html> | ||
<html lang="" xml:lang=""> | ||
<head> | ||
|
||
<meta charset="utf-8" /> | ||
<meta http-equiv="X-UA-Compatible" content="IE=edge" /> | ||
<title>Page not found | Predicting cell states and their variability in single-cell or spatial omics data</title> | ||
<meta name="description" content="Page not found | Predicting cell states and their variability in single-cell or spatial omics data" /> | ||
<meta name="generator" content="bookdown 0.41 and GitBook 2.6.7" /> | ||
|
||
<meta property="og:title" content="Page not found | Predicting cell states and their variability in single-cell or spatial omics data" /> | ||
<meta property="og:type" content="book" /> | ||
|
||
|
||
|
||
|
||
<meta name="twitter:card" content="summary" /> | ||
<meta name="twitter:title" content="Page not found | Predicting cell states and their variability in single-cell or spatial omics data" /> | ||
|
||
|
||
|
||
|
||
|
||
|
||
<meta name="date" content="2024-12-12" /> | ||
|
||
<meta name="viewport" content="width=device-width, initial-scale=1" /> | ||
<meta name="apple-mobile-web-app-capable" content="yes" /> | ||
<meta name="apple-mobile-web-app-status-bar-style" content="black" /> | ||
|
||
|
||
|
||
|
||
<script src="libs/jquery-3.6.0/jquery-3.6.0.min.js"></script> | ||
<script src="https://cdn.jsdelivr.net/npm/[email protected]/dist/fuse.min.js"></script> | ||
<link href="libs/gitbook-2.6.7/css/style.css" rel="stylesheet" /> | ||
<link href="libs/gitbook-2.6.7/css/plugin-table.css" rel="stylesheet" /> | ||
<link href="libs/gitbook-2.6.7/css/plugin-bookdown.css" rel="stylesheet" /> | ||
<link href="libs/gitbook-2.6.7/css/plugin-highlight.css" rel="stylesheet" /> | ||
<link href="libs/gitbook-2.6.7/css/plugin-search.css" rel="stylesheet" /> | ||
<link href="libs/gitbook-2.6.7/css/plugin-fontsettings.css" rel="stylesheet" /> | ||
<link href="libs/gitbook-2.6.7/css/plugin-clipboard.css" rel="stylesheet" /> | ||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
|
||
<link href="libs/anchor-sections-1.1.0/anchor-sections.css" rel="stylesheet" /> | ||
<link href="libs/anchor-sections-1.1.0/anchor-sections-hash.css" rel="stylesheet" /> | ||
<script src="libs/anchor-sections-1.1.0/anchor-sections.js"></script> | ||
|
||
|
||
<style type="text/css"> | ||
pre > code.sourceCode { white-space: pre; position: relative; } | ||
pre > code.sourceCode > span { display: inline-block; line-height: 1.25; } | ||
pre > code.sourceCode > span:empty { height: 1.2em; } | ||
.sourceCode { overflow: visible; } | ||
code.sourceCode > span { color: inherit; text-decoration: inherit; } | ||
pre.sourceCode { margin: 0; } | ||
@media screen { | ||
div.sourceCode { overflow: auto; } | ||
} | ||
@media print { | ||
pre > code.sourceCode { white-space: pre-wrap; } | ||
pre > code.sourceCode > span { text-indent: -5em; padding-left: 5em; } | ||
} | ||
pre.numberSource code | ||
{ counter-reset: source-line 0; } | ||
pre.numberSource code > span | ||
{ position: relative; left: -4em; counter-increment: source-line; } | ||
pre.numberSource code > span > a:first-child::before | ||
{ content: counter(source-line); | ||
position: relative; left: -1em; text-align: right; vertical-align: baseline; | ||
border: none; display: inline-block; | ||
-webkit-touch-callout: none; -webkit-user-select: none; | ||
-khtml-user-select: none; -moz-user-select: none; | ||
-ms-user-select: none; user-select: none; | ||
padding: 0 4px; width: 4em; | ||
color: #aaaaaa; | ||
} | ||
pre.numberSource { margin-left: 3em; border-left: 1px solid #aaaaaa; padding-left: 4px; } | ||
div.sourceCode | ||
{ } | ||
@media screen { | ||
pre > code.sourceCode > span > a:first-child::before { text-decoration: underline; } | ||
} | ||
code span.al { color: #ff0000; font-weight: bold; } /* Alert */ | ||
code span.an { color: #60a0b0; font-weight: bold; font-style: italic; } /* Annotation */ | ||
code span.at { color: #7d9029; } /* Attribute */ | ||
code span.bn { color: #40a070; } /* BaseN */ | ||
code span.bu { color: #008000; } /* BuiltIn */ | ||
code span.cf { color: #007020; font-weight: bold; } /* ControlFlow */ | ||
code span.ch { color: #4070a0; } /* Char */ | ||
code span.cn { color: #880000; } /* Constant */ | ||
code span.co { color: #60a0b0; font-style: italic; } /* Comment */ | ||
code span.cv { color: #60a0b0; font-weight: bold; font-style: italic; } /* CommentVar */ | ||
code span.do { color: #ba2121; font-style: italic; } /* Documentation */ | ||
code span.dt { color: #902000; } /* DataType */ | ||
code span.dv { color: #40a070; } /* DecVal */ | ||
code span.er { color: #ff0000; font-weight: bold; } /* Error */ | ||
code span.ex { } /* Extension */ | ||
code span.fl { color: #40a070; } /* Float */ | ||
code span.fu { color: #06287e; } /* Function */ | ||
code span.im { color: #008000; font-weight: bold; } /* Import */ | ||
code span.in { color: #60a0b0; font-weight: bold; font-style: italic; } /* Information */ | ||
code span.kw { color: #007020; font-weight: bold; } /* Keyword */ | ||
code span.op { color: #666666; } /* Operator */ | ||
code span.ot { color: #007020; } /* Other */ | ||
code span.pp { color: #bc7a00; } /* Preprocessor */ | ||
code span.sc { color: #4070a0; } /* SpecialChar */ | ||
code span.ss { color: #bb6688; } /* SpecialString */ | ||
code span.st { color: #4070a0; } /* String */ | ||
code span.va { color: #19177c; } /* Variable */ | ||
code span.vs { color: #4070a0; } /* VerbatimString */ | ||
code span.wa { color: #60a0b0; font-weight: bold; font-style: italic; } /* Warning */ | ||
</style> | ||
|
||
<style type="text/css"> | ||
|
||
div.hanging-indent{margin-left: 1.5em; text-indent: -1.5em;} | ||
</style> | ||
<style type="text/css"> | ||
/* Used with Pandoc 2.11+ new --citeproc when CSL is used */ | ||
div.csl-bib-body { } | ||
div.csl-entry { | ||
clear: both; | ||
} | ||
.hanging div.csl-entry { | ||
margin-left:2em; | ||
text-indent:-2em; | ||
} | ||
div.csl-left-margin { | ||
min-width:2em; | ||
float:left; | ||
} | ||
div.csl-right-inline { | ||
margin-left:2em; | ||
padding-left:1em; | ||
} | ||
div.csl-indent { | ||
margin-left: 2em; | ||
} | ||
</style> | ||
|
||
</head> | ||
|
||
<body> | ||
|
||
|
||
|
||
<div class="book without-animation with-summary font-size-2 font-family-1" data-basepath="."> | ||
|
||
<div class="book-summary"> | ||
<nav role="navigation"> | ||
|
||
<ul class="summary"> | ||
<li class="chapter" data-level="" data-path="index.html"><a href="index.html"><i class="fa fa-check"></i>Introduction</a></li> | ||
<li class="chapter" data-level="1" data-path="overview-of-svp.html"><a href="overview-of-svp.html"><i class="fa fa-check"></i><b>1</b> Overview of SVP</a></li> | ||
<li class="chapter" data-level="2" data-path="quantification-of-cell-states-using-svp.html"><a href="quantification-of-cell-states-using-svp.html"><i class="fa fa-check"></i><b>2</b> Quantification of cell states using SVP</a> | ||
<ul> | ||
<li class="chapter" data-level="2.1" data-path="quantification-of-cell-states-using-svp.html"><a href="quantification-of-cell-states-using-svp.html#quantification-of-cancersea-etc-function"><i class="fa fa-check"></i><b>2.1</b> Quantification of CancerSEA etc function</a></li> | ||
<li class="chapter" data-level="2.2" data-path="quantification-of-cell-states-using-svp.html"><a href="quantification-of-cell-states-using-svp.html#quantification-of-cell-type"><i class="fa fa-check"></i><b>2.2</b> Quantification of cell-type</a> | ||
<ul> | ||
<li class="chapter" data-level="2.2.1" data-path="quantification-of-cell-states-using-svp.html"><a href="quantification-of-cell-states-using-svp.html#quantification-of-cell-type-using-the-pre-established-marker-gene-sets"><i class="fa fa-check"></i><b>2.2.1</b> Quantification of cell-type using the pre-established marker gene sets</a></li> | ||
<li class="chapter" data-level="2.2.2" data-path="quantification-of-cell-states-using-svp.html"><a href="quantification-of-cell-states-using-svp.html#quantification-of-cell-type-using-the-reference-single-cell-data"><i class="fa fa-check"></i><b>2.2.2</b> Quantification of cell-type using the reference single-cell data</a></li> | ||
</ul></li> | ||
</ul></li> | ||
<li class="chapter" data-level="3" data-path="spatial-statistical-analysis.html"><a href="spatial-statistical-analysis.html"><i class="fa fa-check"></i><b>3</b> Spatial statistical analysis</a> | ||
<ul> | ||
<li class="chapter" data-level="3.1" data-path="spatial-statistical-analysis.html"><a href="spatial-statistical-analysis.html#univariate-spatial-statistical-analysis"><i class="fa fa-check"></i><b>3.1</b> Univariate spatial statistical analysis</a> | ||
<ul> | ||
<li class="chapter" data-level="3.1.1" data-path="spatial-statistical-analysis.html"><a href="spatial-statistical-analysis.html#identification-of-spatial-variable-features"><i class="fa fa-check"></i><b>3.1.1</b> Identification of spatial variable features</a></li> | ||
<li class="chapter" data-level="3.1.2" data-path="spatial-statistical-analysis.html"><a href="spatial-statistical-analysis.html#identification-of-local-spatial-aggregation-areas"><i class="fa fa-check"></i><b>3.1.2</b> Identification of local spatial aggregation areas</a></li> | ||
</ul></li> | ||
<li class="chapter" data-level="3.2" data-path="spatial-statistical-analysis.html"><a href="spatial-statistical-analysis.html#bivariate-spatial-statistical-analysis"><i class="fa fa-check"></i><b>3.2</b> Bivariate spatial statistical analysis</a> | ||
<ul> | ||
<li class="chapter" data-level="3.2.1" data-path="spatial-statistical-analysis.html"><a href="spatial-statistical-analysis.html#global-bivariate-spatial-analysis"><i class="fa fa-check"></i><b>3.2.1</b> Global bivariate spatial analysis</a></li> | ||
<li class="chapter" data-level="3.2.2" data-path="spatial-statistical-analysis.html"><a href="spatial-statistical-analysis.html#local-bivariate-spatial-analysis"><i class="fa fa-check"></i><b>3.2.2</b> Local bivariate spatial analysis</a></li> | ||
</ul></li> | ||
</ul></li> | ||
<li class="chapter" data-level="4" data-path="session-information.html"><a href="session-information.html"><i class="fa fa-check"></i><b>4</b> Session information</a></li> | ||
</ul> | ||
|
||
</nav> | ||
</div> | ||
|
||
<div class="book-body"> | ||
<div class="body-inner"> | ||
<div class="book-header" role="navigation"> | ||
<h1> | ||
<i class="fa fa-circle-o-notch fa-spin"></i><a href="./">Predicting cell states and their variability in single-cell or spatial omics data</a> | ||
</h1> | ||
</div> | ||
|
||
<div class="page-wrapper" tabindex="-1" role="main"> | ||
<div class="page-inner"> | ||
|
||
<section class="normal" id="section-"> | ||
<div id="page-not-found" class="section level1"> | ||
<h1>Page not found</h1> | ||
<p>The page you requested cannot be found (perhaps it was moved or renamed).</p> | ||
<p>You may want to try searching to find the page's new location, or use | ||
the table of contents to find the page you are looking for.</p> | ||
</div> | ||
</section> | ||
|
||
</div> | ||
</div> | ||
</div> | ||
|
||
|
||
</div> | ||
</div> | ||
<script src="libs/gitbook-2.6.7/js/app.min.js"></script> | ||
<script src="libs/gitbook-2.6.7/js/clipboard.min.js"></script> | ||
<script src="libs/gitbook-2.6.7/js/plugin-search.js"></script> | ||
<script src="libs/gitbook-2.6.7/js/plugin-sharing.js"></script> | ||
<script src="libs/gitbook-2.6.7/js/plugin-fontsettings.js"></script> | ||
<script src="libs/gitbook-2.6.7/js/plugin-bookdown.js"></script> | ||
<script src="libs/gitbook-2.6.7/js/jquery.highlight.js"></script> | ||
<script src="libs/gitbook-2.6.7/js/plugin-clipboard.js"></script> | ||
<script> | ||
gitbook.require(["gitbook"], function(gitbook) { | ||
gitbook.start({ | ||
"sharing": { | ||
"github": false, | ||
"facebook": true, | ||
"twitter": true, | ||
"linkedin": false, | ||
"weibo": false, | ||
"instapaper": false, | ||
"vk": false, | ||
"whatsapp": false, | ||
"all": ["facebook", "twitter", "linkedin", "weibo", "instapaper"] | ||
}, | ||
"fontsettings": { | ||
"theme": "white", | ||
"family": "sans", | ||
"size": 2 | ||
}, | ||
"edit": { | ||
"link": null, | ||
"text": null | ||
}, | ||
"history": { | ||
"link": null, | ||
"text": null | ||
}, | ||
"view": { | ||
"link": null, | ||
"text": null | ||
}, | ||
"download": null, | ||
"search": { | ||
"engine": "fuse", | ||
"options": null | ||
}, | ||
"toc": { | ||
"collapse": "subsection" | ||
} | ||
}); | ||
}); | ||
</script> | ||
|
||
</body> | ||
|
||
</html> |
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
This file was deleted.
Oops, something went wrong.
This file was deleted.
Oops, something went wrong.
Oops, something went wrong.