adding some tests to work against a scicat v4 backend.

pyscicat/tests/tests_local.py

@@ -0,0 +1,78 @@
+import unittest
+from ..client import ScicatClient
+from ..model import RawDataset
+from datetime import datetime
+import os
+
+class TestClientLocally(unittest.TestCase):
+    """
+    These tests do not use mocks and are designed to connect to a v4 service for Scicat backend. You can run this easily
+    in docker-compose following the repo https://github.com/SciCatProject/scicatlive. You will also need to use one of
+    the default user accounts or add your own.
+
+    You will need to set environmental variables for
+    BASE_URL - the url of your scicat service e.g. http://localhost:3000/api/v3
+    SCICAT_USER - the name of your scicat user.
+    SCICAT_PASSWORD - the password for your scicat user.
+    """
+
+    def test_client(self):
+        sci_clie = ScicatClient(base_url=os.environ["BASE_URL"], token=None, username=os.environ["SCICAT_USER"], password="SCICAT_PASSWORD")
+        self.assertIsInstance(sci_clie, ScicatClient)
+        print(sci_clie._token)
+
+
+
+    def test_upload_dataset(self):
+        sci_clie = ScicatClient(base_url=os.environ["BASE_URL"], token=None, username=os.environ["SCICAT_USER"], password="SCICAT_PASSWORD")
+
+        payload = RawDataset(
+            datasetName="a guide book",
+            path="/foo/bar",
+            size=42,
+            owner=os.environ["SCICAT_USER"],
+            ownerGroup="Magrateheans",
+            contactEmail="[email protected]",
+            creationLocation="magrathea",
+            creationTime= datetime.isoformat(datetime.now()),
+            instrumentId="earth",
+            proposalId="deepthought",
+            dataFormat="planet",
+            principalInvestigator="A. Mouse",
+            sourceFolder="/foo/bar",
+            scientificMetadata={"a": "field"},
+            sampleId="gargleblaster",
+            accessGroups=[]
+        )
+
+        sci_clie.upload_new_dataset(payload)
+
+
+    def  test_replace_dataset(self):
+        sci_clie = ScicatClient(base_url=os.environ["BASE_URL"], token=None, username=os.environ["SCICAT_USER"], password="SCICAT_PASSWORD")
+
+        pid="PID.SAMPLE.PREFIX48a8f164-166a-4557-bafc-5a7362e39fe7"
+        payload= RawDataset(
+            size=142,
+            owner="slartibartfast",
+            ownerGroup="Magrateheans",
+            contactEmail="[email protected]",
+            creationLocation="magrathea",
+            creationTime=datetime.isoformat(datetime.now()),
+            instrumentId="earth",
+            proposalId="deepthought",
+            dataFormat="planet",
+            principalInvestigator="A. Mouse",
+            sourceFolder="/foo/bar",
+            scientificMetadata={"a": "field"},
+            sampleId="gargleblaster",
+            accessGroups=["Vogons"]
+        )
+        sci_clie.update_dataset(payload, pid)
+
+
+    def test_get_dataset(self):
+        sci_clie = ScicatClient(base_url=os.environ["BASE_URL"], token=None, username=os.environ["SCICAT_USER"], password="SCICAT_PASSWORD")
+        datasets = sci_clie.get_datasets({"owner":os.environ["SCICAT_USER"]})
+        with self.subTest(dataset=datasets):
+            self.assertEqual(dataset["owner"], os.environ["SCICAT_USER"])