fix ci workflow ... #13
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| name: CI | ||
| on: | ||
| workflow_dispatch: | ||
| pull_request: | ||
| push: | ||
| branches: [main] | ||
| permissions: | ||
| contents: read | ||
| inputs: | ||
|
Check failure on line 11 in .github/workflows/test.yaml
|
||
| pre: | ||
| description: 'Install prerelease nbdev/execnb from master?' | ||
| required: false | ||
| default: '' | ||
| version: | ||
| description: 'Version of python to set up' | ||
| required: false | ||
| default: '3.9' | ||
| skip_test: | ||
| description: 'Skip tests?' | ||
| required: false | ||
| default: '' | ||
| flags: | ||
| description: 'Space separated list of nbdev test flags to run that are normally ignored' | ||
| required: false | ||
| default: '' | ||
| torch_cpu: | ||
| description: "Install PyTorch CPU instead of PyTorch Cuda. Has no effect if PyTorch isn't a requirement. Enabled by defaut." | ||
| required: false | ||
| default: true | ||
| jobs: | ||
| test: | ||
| name: nbdev-ci | ||
| using: composite | ||
| runs-on: ubuntu-latest | ||
| steps: | ||
| - uses: actions/checkout@v3 | ||
| - uses: actions/setup-python@v4 | ||
| with: | ||
| python-version: ${{ inputs.version }} | ||
| cache: pip | ||
| cache-dependency-path: settings.ini | ||
| - name: Test with nbdev | ||
| env: | ||
| USE_PRE: ${{ inputs.pre }} | ||
| SKIP_TEST: ${{ inputs.skip_test }} | ||
| FLAGS: ${{ inputs.flags }} | ||
| TORCH_CPU: "${{ inputs.torch_cpu }}" | ||
| shell: bash | ||
| run: | | ||
| set -ux | ||
| python -m pip install --upgrade pip | ||
| if [ $USE_PRE ]; then | ||
| pip install -U git+https://github.com/fastai/fastcore.git | ||
| pip install -U git+https://github.com/fastai/ghapi.git | ||
| pip install -U git+https://github.com/fastai/execnb.git | ||
| pip install -U git+https://github.com/fastai/nbdev.git | ||
| else | ||
| pip install -U nbdev | ||
| fi | ||
| echo "Doing editable install..." | ||
| if [ $TORCH_CPU ]; then | ||
| test -f setup.py && pip install -e ".[dev]" --extra-index-url https://download.pytorch.org/whl/cpu | ||
| else | ||
| test -f setup.py && pip install -e ".[dev]" | ||
| fi | ||
| echo "Check we are starting with clean git checkout" | ||
| if [[ `git status --porcelain -uno` ]]; then | ||
| git diff | ||
| echo "git status is not clean" | ||
| false | ||
| fi | ||
| echo "Trying to strip out notebooks" | ||
| nbdev_clean | ||
| echo "Check that strip out was unnecessary" | ||
| git status -s # display the status to see which nbs need cleaning up | ||
| if [[ `git status --porcelain -uno` ]]; then | ||
| git status -uno | ||
| echo -e "!!! Detected unstripped out notebooks\n!!!Remember to run nbdev_install_hooks" | ||
| echo -e "This error can also happen if you are using an older version of nbdev relative to what is in CI. Please try to upgrade nbdev with the command `pip install -U nbdev`" | ||
| false | ||
| fi | ||
| nbdev_export | ||
| if [[ `git status --porcelain -uno` ]]; then | ||
| echo "::error::Notebooks and library are not in sync. Please run nbdev_export." | ||
| git status -uno | ||
| git diff | ||
| exit 1; | ||
| fi | ||
| echo "Making sure MNE data dependencies are downloaded" | ||
| python -c 'import mne; mne.datasets.sample.data_path(verbose=True)'; | ||
| python -c 'import mne; mne.datasets.testing.data_path(verbose=True)'; | ||
| if [ ! $SKIP_TEST ]; then | ||
| nbdev_test --flags "$FLAGS" | ||
| fi | ||
