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Fix to channel specification in 3d_autoencoderkl notebook #1925

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merged 8 commits into from
Jan 21, 2025
Merged

Fix to channel specification in 3d_autoencoderkl notebook #1925

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5803d00
Recommitting after hard reset
Nov 11, 2024
1735e5a
Fixed one pep8 error.
Nov 11, 2024
c7872ed
Fixed one pep8 error.
Nov 11, 2024
380e563
Merge branch 'Project-MONAI:main' into main
virginiafdez Nov 11, 2024
c478419
Update to the README file to include diffusion autoencoder.
Nov 11, 2024
95f3387
[pre-commit.ci] auto fixes from pre-commit.com hooks
pre-commit-ci[bot] Nov 11, 2024
3617388
Merge branch 'Project-MONAI:main' into main
virginiafdez Jan 20, 2025
d24a090
Modify autoencoderkl as per #1924.
Jan 20, 2025
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6 changes: 3 additions & 3 deletions generation/3d_autoencoderkl/3d_autoencoderkl_tutorial.ipynb
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Original file line number Diff line number Diff line change
Expand Up @@ -178,6 +178,8 @@
"metadata": {},
"outputs": [],
"source": [
"channel = 0 # 0 = Flair\n",
"assert channel in [0, 1, 2, 3], \"Choose a valid channel\"\n",
"all_transforms = [\n",
" transforms.LoadImaged(keys=[\"image\"]),\n",
" transforms.EnsureChannelFirstd(keys=[\"image\"]),\n",
Expand Down Expand Up @@ -207,8 +209,6 @@
}
],
"source": [
"channel = 0 # 0 = Flair\n",
"assert channel in [0, 1, 2, 3], \"Choose a valid channel\"\n",
"# Training\n",
"train_ds = DecathlonDataset(\n",
" root_dir=root_dir,\n",
Expand Down Expand Up @@ -785,7 +785,7 @@
"name": "python",
"nbconvert_exporter": "python",
"pygments_lexer": "ipython3",
"version": "3.12.0"
"version": "3.10.15"
}
},
"nbformat": 4,
Expand Down
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