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fix ci
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Signed-off-by: YunLiu <[email protected]>
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KumoLiu committed Dec 11, 2024
1 parent 7876fc8 commit 57ef4fe
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2 changes: 2 additions & 0 deletions runner.sh
Original file line number Diff line number Diff line change
Expand Up @@ -81,6 +81,7 @@ doesnt_contain_max_epochs=("${doesnt_contain_max_epochs[@]}" bending_energy_diff
doesnt_contain_max_epochs=("${doesnt_contain_max_epochs[@]}" mask_augmentation_example.ipynb)
doesnt_contain_max_epochs=("${doesnt_contain_max_epochs[@]}" maisi_inference_tutorial.ipynb)
doesnt_contain_max_epochs=("${doesnt_contain_max_epochs[@]}" realism_diversity_metrics.ipynb)
doesnt_contain_max_epochs=("${doesnt_contain_max_epochs[@]}" omniverse_integration.ipynb)

# Execution of the notebook in these folders / with the filename cannot be automated
skip_run_papermill=()
Expand Down Expand Up @@ -127,6 +128,7 @@ skip_run_papermill=("${skip_run_papermill[@]}" .*nuclei_classification_infer.ipy
skip_run_papermill=("${skip_run_papermill[@]}" .*nuclick_infer.ipynb*) # https://github.com/Project-MONAI/tutorials/issues/1542
skip_run_papermill=("${skip_run_papermill[@]}" .*unet_segmentation_3d_ignite_clearml.ipynb*) # https://github.com/Project-MONAI/tutorials/issues/1555
skip_run_papermill=("${skip_run_papermill[@]}" .*vista_2d_tutorial_monai.ipynb*)
skip_run_papermill=("${skip_run_papermill[@]}" .*learn2reg_oasis_unpaired_brain_mr.ipynb*)

# output formatting
separator=""
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