add render-module-rmd github action #1

	on:
	pull_request:
	branches:
	- main
	- master
	- development
	push:
	branches:
	- main
	- master
	- development
	paths:
	- .github/workflows/render-module-rmd.yaml
	- fireSense.Rmd
	- fireSense.R

	name: Render module Rmd

	jobs:
	render:
	name: Render module Rmd
	runs-on: ubuntu-latest

	env:
	GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}

	steps:
	- uses: actions/checkout@v4

	- uses: PredictiveEcology/actions/[email protected]

	- name: Install other dependencies
	run: \|
	sudo apt-get install -y \
	libcurl4-openssl-dev \
	libgit2-dev \
	libglpk-dev \
	libmagick++-dev \
	libxml2-dev \
	python3-gdal

	- uses: r-lib/actions/setup-r@v2
	with:
	use-public-rspm: true
	Ncpus: 2

	- uses: r-lib/actions/setup-pandoc@v2

	- uses: PredictiveEcology/actions/[email protected]
	with:
	GitTag: 'development'

	- uses: PredictiveEcology/actions/[email protected]

	- uses: PredictiveEcology/actions/[email protected]

	- name: Install module package and other dependencies
	run: \|
	pkgs <- SpaDES.core::packages(modules = "[[name]]", paths = "..")[[1]]
	Require::Require(pkgs[[1]])
	shell: Rscript {0}

	- name: Render module Rmd
	run: \|
	rmarkdown::render("fireSense.Rmd", encoding = "UTF-8")
	shell: Rscript {0}

	- name: Commit results
	run: \|
	git config user.email "[email protected]"
	git config user.name "GitHub Actions"
	git commit fireSense.html -m 'Re-build fireSense.Rmd' \|\| echo "No changes to commit"
	git push https://${{github.actor}}:${{secrets.GITHUB_TOKEN}}@github.com/${{github.repository}}.git HEAD:${{github.ref}} \|\| echo "No changes to commit"

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