release v26.41.0 #160
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| name: Build & Release PGKB PathVisio for Mac | |
| on: | |
| workflow_dispatch: | |
| branches: | |
| - '*' | |
| push: | |
| branches: | |
| - "main" | |
| paths-ignore: | |
| - "**.md" | |
| jobs: | |
| build: | |
| name: Build and Test | |
| runs-on: macOS-latest | |
| env: | |
| PHARMGKB: /Users/runner/work/releasebot/releasebot/PharmGKB | |
| PHARMGKB_USER: travis | |
| CATALINA_HOME: /Users/runner/work/releasebot/releasebot/tomcat | |
| steps: | |
| - name: Checkout code | |
| uses: actions/checkout@v3 | |
| - name: Set up JDK | |
| uses: actions/setup-java@v3 | |
| with: | |
| distribution: 'temurin' | |
| java-version: '8' | |
| - name: Install Go | |
| uses: actions/setup-go@v3 | |
| with: | |
| go-version: '^1.17.2' | |
| - name: Config Go Cache | |
| uses: actions/cache@v3 | |
| with: | |
| path: ~/go/pkg/mod | |
| key: ${{ runner.os }}-go-mod-${{ hashFiles('**/go.sum') }} | |
| restore-keys: | | |
| ${{ runner.os }}-go-mod- | |
| - name: Install github-release | |
| run: go install github.com/github-release/github-release@latest | |
| - name: Download Tomcat | |
| run: | | |
| tc_url=`curl -s https://tomcat.apache.org/download-90.cgi | grep -oE 'href="https?:.*apache-tomcat-9.[0-9]+.[0-9]+.tar.gz"' | grep -o 'http.*.gz' | head -n1` | |
| echo "Downloading ${tc_url}" | |
| wget -q $tc_url | |
| tc_gz=`basename $tc_url` | |
| tar -xf $tc_gz | |
| tc_dir=`basename $tc_url ".tar.gz"` | |
| ln -s $tc_dir tomcat | |
| - name: Get PharmGKB version | |
| run: echo PGKB_VERSION=`cat version.txt` >> $GITHUB_ENV | |
| - name: Get PathVisio version | |
| run: echo PATHVISIO_VERSION=`cat pathvisio_version.txt` >> $GITHUB_ENV | |
| - run: echo PGKB=${{env.PGKB_VERSION}}, PATHVISIO=${{env.PATHVISIO_VERSION}} | |
| - name: Checkout PharmGKB | |
| uses: actions/checkout@v2 | |
| with: | |
| token: ${{ secrets.GH_TOKEN }} | |
| repository: PharmGKB/PharmGKB | |
| ref: ${{env.PGKB_VERSION}} | |
| path: './PharmGKB' | |
| - name: Checkout pgkb-common | |
| uses: actions/checkout@v3 | |
| with: | |
| token: ${{ secrets.GH_TOKEN }} | |
| repository: PharmGKB/pgkb-common | |
| ref: 'main' | |
| path: './PharmGKB/pgkb-common' | |
| - name: Compile PathVisio | |
| run: | | |
| cd PharmGKB | |
| cp passwords.properties.template passwords.properties | |
| ant pathvisio-mac | |
| - name: Upload PathVisio | |
| env: | |
| GH_TOKEN: ${{ secrets.GH_TOKEN }} | |
| run: | | |
| cd PharmGKB | |
| github-release upload --security-token ${{ secrets.GH_TOKEN }} \ | |
| --user PharmGKB \ | |
| --repo PharmGKB \ | |
| --tag ${{env.PGKB_VERSION}} \ | |
| --name "pgkb-pathvisio.zip" \ | |
| --file build/dist/pgkb-pathvisio.zip | |
| - name: Upload PathVisio (mac) | |
| run: | | |
| cd PharmGKB | |
| github-release upload --security-token ${{ secrets.GH_TOKEN }} \ | |
| --user PharmGKB \ | |
| --repo PharmGKB \ | |
| --tag ${{env.PGKB_VERSION}} \ | |
| --name "pgkb-pathvisio.app.full.zip" \ | |
| --file build/dist/pgkb-pathvisio.app.full.zip | |
| - name: Create releasebot release | |
| if: env.PGKB_VERSION == env.PATHVISIO_VERSION | |
| run: | | |
| github-release release --security-token ${{ secrets.GH_TOKEN }} \ | |
| --user PharmGKB \ | |
| --repo releasebot \ | |
| --tag ${{env.PGKB_VERSION}} \ | |
| --name ${{env.PGKB_VERSION}} | |
| - name: Upload timestamp | |
| if: env.PGKB_VERSION == env.PATHVISIO_VERSION | |
| env: | |
| GH_TOKEN: ${{ secrets.GH_TOKEN }} | |
| run: | | |
| cd PharmGKB | |
| github-release upload --security-token ${{ secrets.GH_TOKEN }} \ | |
| --user PharmGKB \ | |
| --repo releasebot \ | |
| --tag ${{env.PGKB_VERSION}} \ | |
| --name "pgkb-pathvisio.timestamp.txt" \ | |
| --file build/dist/pgkb-pathvisio.timestamp.txt | |
| - name: Send Slack notification on failure | |
| if: failure() | |
| env: | |
| SLACK_BOT_TOKEN: ${{ secrets.SLACK_NOTIFICATIONS_BOT_TOKEN }} | |
| uses: voxmedia/github-action-slack-notify-build@v1 | |
| with: | |
| channel: dev | |
| status: FAILED | |
| color: danger |