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OpenSourceBrain · Nov 17, 2023 · 2655c58 · 2655c58
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Showing 25 changed files with 75 additions and 75 deletions.
diff --git a/NetPyNE/ACnet/AMPA_syn.mod b/NetPyNE/ACnet/AMPA_syn.mod
@@ -3,9 +3,9 @@ TITLE Mod file for component: Component(id=AMPA_syn type=expTwoSynapse)
 COMMENT
 
     This NEURON file has been generated by org.neuroml.export (see https://github.com/NeuroML/org.neuroml.export)
-         org.neuroml.export  v1.9.1
-         org.neuroml.model   v1.9.1
-         jLEMS               v0.10.8
+         org.neuroml.export  v1.10.0
+         org.neuroml.model   v1.10.0
+         jLEMS               v0.11.0
 
 ENDCOMMENT
 

diff --git a/NetPyNE/ACnet/AMPA_syn_inh.mod b/NetPyNE/ACnet/AMPA_syn_inh.mod
@@ -3,9 +3,9 @@ TITLE Mod file for component: Component(id=AMPA_syn_inh type=expTwoSynapse)
 COMMENT
 
     This NEURON file has been generated by org.neuroml.export (see https://github.com/NeuroML/org.neuroml.export)
-         org.neuroml.export  v1.9.1
-         org.neuroml.model   v1.9.1
-         jLEMS               v0.10.8
+         org.neuroml.export  v1.10.0
+         org.neuroml.model   v1.10.0
+         jLEMS               v0.11.0
 
 ENDCOMMENT
 

diff --git a/NetPyNE/ACnet/BackgroundRandomIClamps.mod b/NetPyNE/ACnet/BackgroundRandomIClamps.mod
@@ -3,9 +3,9 @@ TITLE Mod file for component: Component(id=BackgroundRandomIClamps type=pulseGen
 COMMENT
 
     This NEURON file has been generated by org.neuroml.export (see https://github.com/NeuroML/org.neuroml.export)
-         org.neuroml.export  v1.9.1
-         org.neuroml.model   v1.9.1
-         jLEMS               v0.10.8
+         org.neuroml.export  v1.10.0
+         org.neuroml.model   v1.10.0
+         jLEMS               v0.11.0
 
 ENDCOMMENT
 

diff --git a/NetPyNE/ACnet/Ca_conc.mod b/NetPyNE/ACnet/Ca_conc.mod
@@ -3,9 +3,9 @@ TITLE Mod file for component: Component(id=Ca_conc type=fixedFactorConcentration
 COMMENT
 
     This NEURON file has been generated by org.neuroml.export (see https://github.com/NeuroML/org.neuroml.export)
-         org.neuroml.export  v1.9.1
-         org.neuroml.model   v1.9.1
-         jLEMS               v0.10.8
+         org.neuroml.export  v1.10.0
+         org.neuroml.model   v1.10.0
+         jLEMS               v0.11.0
 
 ENDCOMMENT
 

diff --git a/NetPyNE/ACnet/Ca_pyr.mod b/NetPyNE/ACnet/Ca_pyr.mod
@@ -3,9 +3,9 @@ TITLE Mod file for component: Component(id=Ca_pyr type=ionChannelHH)
 COMMENT
 
     This NEURON file has been generated by org.neuroml.export (see https://github.com/NeuroML/org.neuroml.export)
-         org.neuroml.export  v1.9.1
-         org.neuroml.model   v1.9.1
-         jLEMS               v0.10.8
+         org.neuroml.export  v1.10.0
+         org.neuroml.model   v1.10.0
+         jLEMS               v0.11.0
 
 ENDCOMMENT
 

diff --git a/NetPyNE/ACnet/GABA_syn.mod b/NetPyNE/ACnet/GABA_syn.mod
@@ -3,9 +3,9 @@ TITLE Mod file for component: Component(id=GABA_syn type=expTwoSynapse)
 COMMENT
 
     This NEURON file has been generated by org.neuroml.export (see https://github.com/NeuroML/org.neuroml.export)
-         org.neuroml.export  v1.9.1
-         org.neuroml.model   v1.9.1
-         jLEMS               v0.10.8
+         org.neuroml.export  v1.10.0
+         org.neuroml.model   v1.10.0
+         jLEMS               v0.11.0
 
 ENDCOMMENT
 

diff --git a/NetPyNE/ACnet/GABA_syn_inh.mod b/NetPyNE/ACnet/GABA_syn_inh.mod
@@ -3,9 +3,9 @@ TITLE Mod file for component: Component(id=GABA_syn_inh type=expTwoSynapse)
 COMMENT
 
     This NEURON file has been generated by org.neuroml.export (see https://github.com/NeuroML/org.neuroml.export)
-         org.neuroml.export  v1.9.1
-         org.neuroml.model   v1.9.1
-         jLEMS               v0.10.8
+         org.neuroml.export  v1.10.0
+         org.neuroml.model   v1.10.0
+         jLEMS               v0.11.0
 
 ENDCOMMENT
 

diff --git a/NetPyNE/ACnet/Kahp_pyr.mod b/NetPyNE/ACnet/Kahp_pyr.mod
@@ -3,9 +3,9 @@ TITLE Mod file for component: Component(id=Kahp_pyr type=ionChannelHH)
 COMMENT
 
     This NEURON file has been generated by org.neuroml.export (see https://github.com/NeuroML/org.neuroml.export)
-         org.neuroml.export  v1.9.1
-         org.neuroml.model   v1.9.1
-         jLEMS               v0.10.8
+         org.neuroml.export  v1.10.0
+         org.neuroml.model   v1.10.0
+         jLEMS               v0.11.0
 
 ENDCOMMENT
 

diff --git a/NetPyNE/ACnet/Kdr_bask.mod b/NetPyNE/ACnet/Kdr_bask.mod
@@ -3,9 +3,9 @@ TITLE Mod file for component: Component(id=Kdr_bask type=ionChannelHH)
 COMMENT
 
     This NEURON file has been generated by org.neuroml.export (see https://github.com/NeuroML/org.neuroml.export)
-         org.neuroml.export  v1.9.1
-         org.neuroml.model   v1.9.1
-         jLEMS               v0.10.8
+         org.neuroml.export  v1.10.0
+         org.neuroml.model   v1.10.0
+         jLEMS               v0.11.0
 
 ENDCOMMENT
 

diff --git a/NetPyNE/ACnet/Kdr_pyr.mod b/NetPyNE/ACnet/Kdr_pyr.mod
@@ -3,9 +3,9 @@ TITLE Mod file for component: Component(id=Kdr_pyr type=ionChannelHH)
 COMMENT
 
     This NEURON file has been generated by org.neuroml.export (see https://github.com/NeuroML/org.neuroml.export)
-         org.neuroml.export  v1.9.1
-         org.neuroml.model   v1.9.1
-         jLEMS               v0.10.8
+         org.neuroml.export  v1.10.0
+         org.neuroml.model   v1.10.0
+         jLEMS               v0.11.0
 
 ENDCOMMENT
 

diff --git a/NetPyNE/ACnet/LEMS_MediumNet_netpyne.py b/NetPyNE/ACnet/LEMS_MediumNet_netpyne.py
@@ -37,9 +37,9 @@
 
 
     This NETPYNE file has been generated by org.neuroml.export (see https://github.com/NeuroML/org.neuroml.export)
-         org.neuroml.export  v1.9.1
-         org.neuroml.model   v1.9.1
-         jLEMS               v0.10.8
+         org.neuroml.export  v1.10.0
+         org.neuroml.model   v1.10.0
+         jLEMS               v0.11.0
 
 '''
 # Main NetPyNE script for: network_ACnet2
@@ -69,7 +69,7 @@ def __init__(self, tstop=500.0, dt=0.01, seed=123456789, save_json=False):
         self.report_file.write('SimulationFile=%s\n'%__file__)
         self.report_file.write('PythonVersion=%s\n'%sys.version.replace('\n',' '))
         self.report_file.write('NeuronVersion=%s\n'%h.nrnversion())
-        self.report_file.write('NeuroMLExportVersion=1.9.1\n')
+        self.report_file.write('NeuroMLExportVersion=1.10.0\n')
         self.report_file.close()
 
 

diff --git a/NetPyNE/ACnet/LeakConductance_bask.mod b/NetPyNE/ACnet/LeakConductance_bask.mod
@@ -3,9 +3,9 @@ TITLE Mod file for component: Component(id=LeakConductance_bask type=ionChannelP
 COMMENT
 
     This NEURON file has been generated by org.neuroml.export (see https://github.com/NeuroML/org.neuroml.export)
-         org.neuroml.export  v1.9.1
-         org.neuroml.model   v1.9.1
-         jLEMS               v0.10.8
+         org.neuroml.export  v1.10.0
+         org.neuroml.model   v1.10.0
+         jLEMS               v0.11.0
 
 ENDCOMMENT
 

diff --git a/NetPyNE/ACnet/LeakConductance_pyr.mod b/NetPyNE/ACnet/LeakConductance_pyr.mod
@@ -3,9 +3,9 @@ TITLE Mod file for component: Component(id=LeakConductance_pyr type=ionChannelPa
 COMMENT
 
     This NEURON file has been generated by org.neuroml.export (see https://github.com/NeuroML/org.neuroml.export)
-         org.neuroml.export  v1.9.1
-         org.neuroml.model   v1.9.1
-         jLEMS               v0.10.8
+         org.neuroml.export  v1.10.0
+         org.neuroml.model   v1.10.0
+         jLEMS               v0.11.0
 
 ENDCOMMENT
 

diff --git a/NetPyNE/ACnet/Na_bask.mod b/NetPyNE/ACnet/Na_bask.mod
@@ -3,9 +3,9 @@ TITLE Mod file for component: Component(id=Na_bask type=ionChannelHH)
 COMMENT
 
     This NEURON file has been generated by org.neuroml.export (see https://github.com/NeuroML/org.neuroml.export)
-         org.neuroml.export  v1.9.1
-         org.neuroml.model   v1.9.1
-         jLEMS               v0.10.8
+         org.neuroml.export  v1.10.0
+         org.neuroml.model   v1.10.0
+         jLEMS               v0.11.0
 
 ENDCOMMENT
 

diff --git a/NetPyNE/ACnet/Na_pyr.mod b/NetPyNE/ACnet/Na_pyr.mod
@@ -3,9 +3,9 @@ TITLE Mod file for component: Component(id=Na_pyr type=ionChannelHH)
 COMMENT
 
     This NEURON file has been generated by org.neuroml.export (see https://github.com/NeuroML/org.neuroml.export)
-         org.neuroml.export  v1.9.1
-         org.neuroml.model   v1.9.1
-         jLEMS               v0.10.8
+         org.neuroml.export  v1.10.0
+         org.neuroml.model   v1.10.0
+         jLEMS               v0.11.0
 
 ENDCOMMENT
 

diff --git a/NetPyNE/GapJunctions/LEMS_GJ_netpyne.py b/NetPyNE/GapJunctions/LEMS_GJ_netpyne.py
@@ -11,9 +11,9 @@
 
 
     This NETPYNE file has been generated by org.neuroml.export (see https://github.com/NeuroML/org.neuroml.export)
-         org.neuroml.export  v1.9.1
-         org.neuroml.model   v1.9.1
-         jLEMS               v0.10.8
+         org.neuroml.export  v1.10.0
+         org.neuroml.model   v1.10.0
+         jLEMS               v0.11.0
 
 '''
 # Main NetPyNE script for: net1
@@ -43,7 +43,7 @@ def __init__(self, tstop=700.0, dt=0.01, seed=123456789, save_json=False):
         self.report_file.write('SimulationFile=%s\n'%__file__)
         self.report_file.write('PythonVersion=%s\n'%sys.version.replace('\n',' '))
         self.report_file.write('NeuronVersion=%s\n'%h.nrnversion())
-        self.report_file.write('NeuroMLExportVersion=1.9.1\n')
+        self.report_file.write('NeuroMLExportVersion=1.10.0\n')
         self.report_file.close()
 
 

diff --git a/NetPyNE/GapJunctions/gj1.mod b/NetPyNE/GapJunctions/gj1.mod
@@ -3,9 +3,9 @@ TITLE Mod file for component: Component(id=gj1 type=gapJunction)
 COMMENT
 
     This NEURON file has been generated by org.neuroml.export (see https://github.com/NeuroML/org.neuroml.export)
-         org.neuroml.export  v1.9.1
-         org.neuroml.model   v1.9.1
-         jLEMS               v0.10.8
+         org.neuroml.export  v1.10.0
+         org.neuroml.model   v1.10.0
+         jLEMS               v0.11.0
 
 ENDCOMMENT
 

diff --git a/NetPyNE/GapJunctions/iaf.mod b/NetPyNE/GapJunctions/iaf.mod
@@ -3,9 +3,9 @@ TITLE Mod file for component: Component(id=iaf type=iafCell)
 COMMENT
 
     This NEURON file has been generated by org.neuroml.export (see https://github.com/NeuroML/org.neuroml.export)
-         org.neuroml.export  v1.9.1
-         org.neuroml.model   v1.9.1
-         jLEMS               v0.10.8
+         org.neuroml.export  v1.10.0
+         org.neuroml.model   v1.10.0
+         jLEMS               v0.11.0
 
 ENDCOMMENT
 

diff --git a/NetPyNE/GapJunctions/pulseGen1.mod b/NetPyNE/GapJunctions/pulseGen1.mod
@@ -3,9 +3,9 @@ TITLE Mod file for component: Component(id=pulseGen1 type=pulseGenerator)
 COMMENT
 
     This NEURON file has been generated by org.neuroml.export (see https://github.com/NeuroML/org.neuroml.export)
-         org.neuroml.export  v1.9.1
-         org.neuroml.model   v1.9.1
-         jLEMS               v0.10.8
+         org.neuroml.export  v1.10.0
+         org.neuroml.model   v1.10.0
+         jLEMS               v0.11.0
 
 ENDCOMMENT
 

diff --git a/NetPyNE/GapJunctions/pulseGen2.mod b/NetPyNE/GapJunctions/pulseGen2.mod
@@ -3,9 +3,9 @@ TITLE Mod file for component: Component(id=pulseGen2 type=pulseGenerator)
 COMMENT
 
     This NEURON file has been generated by org.neuroml.export (see https://github.com/NeuroML/org.neuroml.export)
-         org.neuroml.export  v1.9.1
-         org.neuroml.model   v1.9.1
-         jLEMS               v0.10.8
+         org.neuroml.export  v1.10.0
+         org.neuroml.model   v1.10.0
+         jLEMS               v0.11.0
 
 ENDCOMMENT
 

diff --git a/NetPyNE/LEMS_2007One_netpyne.py b/NetPyNE/LEMS_2007One_netpyne.py
@@ -9,9 +9,9 @@
 
 
     This NETPYNE file has been generated by org.neuroml.export (see https://github.com/NeuroML/org.neuroml.export)
-         org.neuroml.export  v1.9.1
-         org.neuroml.model   v1.9.1
-         jLEMS               v0.10.8
+         org.neuroml.export  v1.10.0
+         org.neuroml.model   v1.10.0
+         jLEMS               v0.11.0
 
 '''
 # Main NetPyNE script for: net1

diff --git a/NetPyNE/NET_2007One.net.nml b/NetPyNE/NET_2007One.net.nml
@@ -1,6 +1,6 @@
 <neuroml xmlns="http://www.neuroml.org/schema/neuroml2"
     xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
-    xsi:schemaLocation="http://www.neuroml.org/schema/neuroml2 https://raw.githubusercontent.com/NeuroML/NeuroML2/development/Schemas/NeuroML2/NeuroML_v2.3.xsd"
+    xsi:schemaLocation="http://www.neuroml.org/schema/neuroml2 https://raw.githubusercontent.com/NeuroML/NeuroML2/development/Schemas/NeuroML2/NeuroML_v2.3.1.xsd"
     id="Exported_from_LEMS">
 
 <izhikevich2007Cell id="RS" v0="-60mV" C="100 pF" k="0.7 nS_per_mV" vr="-60 mV" vt="-40 mV" vpeak="35 mV" a="0.03 per_ms" b="-2 nS" c="-50 mV" d="100 pA"/>

diff --git a/NetPyNE/RS.mod b/NetPyNE/RS.mod
@@ -3,9 +3,9 @@ TITLE Mod file for component: Component(id=RS type=izhikevich2007Cell)
 COMMENT
 
     This NEURON file has been generated by org.neuroml.export (see https://github.com/NeuroML/org.neuroml.export)
-         org.neuroml.export  v1.9.1
-         org.neuroml.model   v1.9.1
-         jLEMS               v0.10.8
+         org.neuroml.export  v1.10.0
+         org.neuroml.model   v1.10.0
+         jLEMS               v0.11.0
 
 ENDCOMMENT
 

diff --git a/NetPyNE/RS_Iext.mod b/NetPyNE/RS_Iext.mod
@@ -3,9 +3,9 @@ TITLE Mod file for component: Component(id=RS_Iext type=pulseGenerator)
 COMMENT
 
     This NEURON file has been generated by org.neuroml.export (see https://github.com/NeuroML/org.neuroml.export)
-         org.neuroml.export  v1.9.1
-         org.neuroml.model   v1.9.1
-         jLEMS               v0.10.8
+         org.neuroml.export  v1.10.0
+         org.neuroml.model   v1.10.0
+         jLEMS               v0.11.0
 
 ENDCOMMENT
 

diff --git a/NetPyNE/UI/LEMS_HHSimple_netpyne.py b/NetPyNE/UI/LEMS_HHSimple_netpyne.py
@@ -9,9 +9,9 @@
 
 
     This NETPYNE file has been generated by org.neuroml.export (see https://github.com/NeuroML/org.neuroml.export)
-         org.neuroml.export  v1.9.1
-         org.neuroml.model   v1.9.1
-         jLEMS               v0.10.8
+         org.neuroml.export  v1.10.0
+         org.neuroml.model   v1.10.0
+         jLEMS               v0.11.0
 
 '''
 # Main NetPyNE script for: HHCellNetwork