Skip to content

Commit

Permalink
Update README.md
Browse files Browse the repository at this point in the history
  • Loading branch information
JiayuanDing100 authored Sep 15, 2024
1 parent d816dd2 commit d7f0b33
Showing 1 changed file with 13 additions and 12 deletions.
25 changes: 13 additions & 12 deletions README.md
Original file line number Diff line number Diff line change
Expand Up @@ -2,6 +2,19 @@

## SpatialCTD is officially on [[Journal of Computational Biology]](https://home.liebertpub.com/publications/journal-of-computational-biology/31)). (paper link: [[paper]](https://www.liebertpub.com/doi/full/10.1089/cmb.2024.0532?casa_token=_P3IPFNlLXEAAAAA%3Ag8fIyF22kRmCZv_wADNUCS0z3sdgdqCeFe93mL7UC7jf7j1P9juxBTgHU4on1y58lpSqtEBTdZFXxQ))

## Citation

If you find our work useful in your research, please consider citing our SpatialCTD paper:

```bibtex
@article{ding2024spatialctd,
title={SpatialCTD: A Large-Scale Tumor Microenvironment Spatial Transcriptomic Dataset to Evaluate Cell Type Deconvolution for Immuno-Oncology},
author={Ding, Jiayuan and Li, Lingxiao and Lu, Qiaolin and Venegas, Julian and Wang, Yixin and Wu, Lidan and Jin, Wei and Wen, Hongzhi and Liu, Renming and Tang, Wenzhuo and others},
journal={Journal of Computational Biology},
year={2024},
publisher={Mary Ann Liebert, Inc., publishers 140 Huguenot Street, 3rd Floor New~…}
}
```

## GNNDeconvolver Installation and Running

Expand Down Expand Up @@ -42,16 +55,4 @@ A few required inputs are as below:
<img src="/images/GNN.jpg" alt="pdf-image" width="50%">


## Citation

If you find our work useful in your research, please consider citing our SpatialCTD paper:

```bibtex
@article{ding2024spatialctd,
title={SpatialCTD: A Large-Scale Tumor Microenvironment Spatial Transcriptomic Dataset to Evaluate Cell Type Deconvolution for Immuno-Oncology},
author={Ding, Jiayuan and Li, Lingxiao and Lu, Qiaolin and Venegas, Julian and Wang, Yixin and Wu, Lidan and Jin, Wei and Wen, Hongzhi and Liu, Renming and Tang, Wenzhuo and others},
journal={Journal of Computational Biology},
year={2024},
publisher={Mary Ann Liebert, Inc., publishers 140 Huguenot Street, 3rd Floor New~…}
}
```

0 comments on commit d7f0b33

Please sign in to comment.