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Neural-Systems-at-UIO · Nov 21, 2024 · 3b6e08b · 3b6e08b
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 # PyNutil
-PyNutil is under development. It currently has known bugs (errors in region area calculations) - do not use. 
+PyNutil is under development. 
+
+> [!WARNING]
+> PyNutil currently has known bugs (errors in region area calculations) - do not use. 
 
 PyNutil is a Python library for brain-wide quantification and spatial analysis of features in serial section images from mouse and rat brain. It aims to replicate the Quantifier feature of the Nutil software (RRID: SCR_017183). It builds on registration to a standardised reference atlas with the QuickNII (RRID:SCR_016854) and VisuAlign software (RRID:SCR_017978) and feature extraction by segmentation with an image analysis software such as ilastik (RRID:SCR_015246).