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@NIH-CARD

Center for Alzheimer’s and Related Dementias (CARD)

Repository for Center for Alzheimer’s and Related Dementias projects

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  1. MA_MA_meta MA_MA_meta Public

    Repository for CARD's ongoing multi-ancestry meta-analysis efforts.

    Jupyter Notebook 8 2

  2. ProtPipe ProtPipe Public

    R 6 2

  3. proteogenomic-pipeline proteogenomic-pipeline Public

    work under progress ...

    Shell 4

  4. NDD_risk_variant_clustering NDD_risk_variant_clustering Public

    Analysis of GWAS-significant SNPs across NDDs

    Jupyter Notebook 4 1

  5. AlignedUMAP-BiomedicalData AlignedUMAP-BiomedicalData Public

    Aligned-UMAP for longitudinal datasets analysis in biomedical research

    Jupyter Notebook 3 3

  6. Long-read-sequencing-README Long-read-sequencing-README Public

    Shell 2

Repositories

Showing 10 of 36 repositories
  • CARDBiomedBench Public
    NIH-CARD/CARDBiomedBench’s past year of commit activity
    Python 2 Apache-2.0 0 0 0 Updated Jan 20, 2025
  • ProtPipe Public
    NIH-CARD/ProtPipe’s past year of commit activity
    R 6 MIT 2 0 0 Updated Jan 3, 2025
  • cellPaintingAnnotation Public
    NIH-CARD/cellPaintingAnnotation’s past year of commit activity
    Jupyter Notebook 0 MIT 0 0 0 Updated Jan 3, 2025
  • CARDlongread_NABEC_HBCC_QTL_manuscript Public

    Code repository for analysis performed on NABEC/HBCC ONT WGS data release, including QTL analysis workflows.

    NIH-CARD/CARDlongread_NABEC_HBCC_QTL_manuscript’s past year of commit activity
    Jupyter Notebook 1 1 0 0 Updated Dec 18, 2024
  • brain-taxonomy Public

    Tools and artifacts for the generic human brain tissue taxonomy for development of cell type assignment of single nuclei/cells from RNA seq experiments.

    NIH-CARD/brain-taxonomy’s past year of commit activity
    Python 0 BSD-3-Clause 0 0 0 Updated Nov 7, 2024
  • ADRD-GeneticDiversity-Biobanks Public

    This is the online repository for the article titled "Biobank-scale characterization of Alzheimer’s disease and related dementias across diverse ancestries identifies risk, protective and resilient genetic variation linked to disease etiology".

    NIH-CARD/ADRD-GeneticDiversity-Biobanks’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Nov 5, 2024
  • Gut-Brain-Nexus Public
    NIH-CARD/Gut-Brain-Nexus’s past year of commit activity
    Jupyter Notebook 0 MIT 0 0 0 Updated Oct 20, 2024
  • Neurite-WT-RBP-KD Public
    NIH-CARD/Neurite-WT-RBP-KD’s past year of commit activity
    R 0 MIT 0 0 0 Updated Sep 17, 2024
  • scvi-multiome Public Forked from shahrozeabbas/scvi-multiome

    Snakemake Workflow for using SCVI on scMultiome Datasets

    NIH-CARD/scvi-multiome’s past year of commit activity
    Python 0 GPL-3.0 2 0 0 Updated Sep 4, 2024
  • CARDlongread_meth_R.9vs10 Public

    Comparison of methylation calling between ONT long-read R.9 and R.10 data

    NIH-CARD/CARDlongread_meth_R.9vs10’s past year of commit activity
    Python 1 1 0 0 Updated Aug 7, 2024
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