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Version 0.3.4

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@MatthiasLienhard MatthiasLienhard released this 03 Jul 10:23
· 3 commits to master since this release

[0.3.4]

  • fixing #8: AssertationError when unifying TSS/PAS between transcript
  • improved domain plots: ORF start and end do not appear like exon exon boundaries.
  • API change: separated ORF prediction from QC metrics calculation.
  • new feature: count number of upstream start codons in Gene.add_orfs() (called by default when adding QC metrics to transcriptome)
  • new feature: calculate Fickett testcode and hexamer score for longest ORFs, to separate coding and noncoding genes.