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update catalog
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github-actions committed Jul 19, 2024
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Showing 37 changed files with 37 additions and 37 deletions.
2 changes: 1 addition & 1 deletion catalog/summaries/Biological/Daily_Bloom_binary/collection.json
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"interval": [
[
"2023-10-01T00:00:00Z",
"2024-08-23T00:00:00Z"
"2024-08-24T00:00:00Z"
]
]
}
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2 changes: 1 addition & 1 deletion catalog/summaries/Biological/Daily_Bloom_binary/models/climatology.json
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"description": "Historical DOY mean and sd. Assumes normal distribution",
"datetime": "2024-07-19T00:00:00Z",
"start_datetime": "2024-02-09T00:00:00Z",
"end_datetime": "2024-08-23T00:00:00Z",
"end_datetime": "2024-08-24T00:00:00Z",
"providers": [
{
"url": "https://github.com/LTREB-reservoirs/vera4cast/blob/main/models/run_terrestrial_baselines.R",
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2 changes: 1 addition & 1 deletion catalog/summaries/Biological/Daily_Bloom_binary/models/fableARIMA.json
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"description": "ARIMA fit using the ARIMA() function in the fable R package",
"datetime": "2024-07-19T00:00:00Z",
"start_datetime": "2023-10-01T00:00:00Z",
"end_datetime": "2024-08-22T00:00:00Z",
"end_datetime": "2024-08-23T00:00:00Z",
"providers": [
{
"url": "https://github.com/melofton/vera4casts/blob/main/code/function_library/predict/fableARIMA.R",
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2 changes: 1 addition & 1 deletion catalog/summaries/Biological/Daily_Bloom_binary/models/fableETS.json
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"description": "fable package exponential smoothing model fable::ETS()",
"datetime": "2024-07-19T00:00:00Z",
"start_datetime": "2023-10-01T00:00:00Z",
"end_datetime": "2024-08-22T00:00:00Z",
"end_datetime": "2024-08-23T00:00:00Z",
"providers": [
{
"url": "https://github.com/melofton/vera4casts/blob/main/code/function_library/predict/fableETS.R",
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2 changes: 1 addition & 1 deletion catalog/summaries/Biological/Daily_Bloom_binary/models/fableNNETAR.json
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"description": "autoregressive neural net fit using the NNETAR() function in the fable R package",
"datetime": "2024-07-19T00:00:00Z",
"start_datetime": "2023-10-01T00:00:00Z",
"end_datetime": "2024-08-22T00:00:00Z",
"end_datetime": "2024-08-23T00:00:00Z",
"providers": [
{
"url": "https://github.com/melofton/vera4casts/blob/main/code/function_library/predict/fableNNETAR.R",
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2 changes: 1 addition & 1 deletion catalog/summaries/Biological/Daily_Bloom_binary/models/glm_aed_v1.json
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"description": "GLM-AED with Ensemble Kalman Filter as implemented in FLARE. This version used DA to update model states but not model parameters.",
"datetime": "2024-07-19T00:00:00Z",
"start_datetime": "2023-10-20T00:00:00Z",
"end_datetime": "2024-08-21T00:00:00Z",
"end_datetime": "2024-08-22T00:00:00Z",
"providers": [
{
"url": "https://github.com/FLARE-forecast/FCRE-forecast-code/blob/main/workflows/glm_aed/combined_run_aed.R",
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2 changes: 1 addition & 1 deletion catalog/summaries/Biological/Daily_Bloom_binary/models/historic_mean.json
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"description": "Calculates the mean state from the historic timeseries and applies this to the forecast horizon. The model uses the fable R package MEAN() function to fit this model, with the uncertainty generated from the residuals of the fitted model.",
"datetime": "2024-07-19T00:00:00Z",
"start_datetime": "2024-02-09T00:00:00Z",
"end_datetime": "2024-08-21T00:00:00Z",
"end_datetime": "2024-08-22T00:00:00Z",
"providers": [
{
"url": "https://github.com/OlssonF/vera4cast/blob/main/R/fableMeanModelFunction.R",
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2 changes: 1 addition & 1 deletion catalog/summaries/Biological/Daily_Bloom_binary/models/monthly_mean.json
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"description": "This model calculates a monthly mean from the historic data and assigns this as the mean prediction for any day within that month. The standard deviation of the observations for that month is given as the standard deviation of the forecast.",
"datetime": "2024-07-19T00:00:00Z",
"start_datetime": "2024-02-09T00:00:00Z",
"end_datetime": "2024-08-23T00:00:00Z",
"end_datetime": "2024-08-24T00:00:00Z",
"providers": [
{
"url": "https://github.com/OlssonF/vera4cast/blob/main/R/MonthlyMeanModelFunction.R",
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2 changes: 1 addition & 1 deletion catalog/summaries/Biological/Daily_Bloom_binary/models/persistenceRW.json
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"description": "Random walk from the fable package with ensembles used to represent uncertainty",
"datetime": "2024-07-19T00:00:00Z",
"start_datetime": "2024-02-09T00:00:00Z",
"end_datetime": "2024-08-21T00:00:00Z",
"end_datetime": "2024-08-22T00:00:00Z",
"providers": [
{
"url": "https://github.com/LTREB-reservoirs/vera4cast/blob/main/models/run_terrestrial_baselines.R",
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2 changes: 1 addition & 1 deletion catalog/summaries/Biological/Daily_Chlorophyll-a/collection.json
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"interval": [
[
"2023-10-01T00:00:00Z",
"2024-08-23T00:00:00Z"
"2024-08-24T00:00:00Z"
]
]
}
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2 changes: 1 addition & 1 deletion catalog/summaries/Biological/Daily_Chlorophyll-a/models/climatology.json
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Expand Up @@ -18,7 +18,7 @@
"description": "Historical DOY mean and sd. Assumes normal distribution",
"datetime": "2024-07-19T00:00:00Z",
"start_datetime": "2023-10-02T00:00:00Z",
"end_datetime": "2024-08-23T00:00:00Z",
"end_datetime": "2024-08-24T00:00:00Z",
"providers": [
{
"url": "https://github.com/LTREB-reservoirs/vera4cast/blob/main/models/run_terrestrial_baselines.R",
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2 changes: 1 addition & 1 deletion catalog/summaries/Biological/Daily_Chlorophyll-a/models/fableARIMA.json
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Expand Up @@ -18,7 +18,7 @@
"description": "ARIMA fit using the ARIMA() function in the fable R package",
"datetime": "2024-07-19T00:00:00Z",
"start_datetime": "2023-10-01T00:00:00Z",
"end_datetime": "2024-08-22T00:00:00Z",
"end_datetime": "2024-08-23T00:00:00Z",
"providers": [
{
"url": "https://github.com/melofton/vera4casts/blob/main/code/function_library/predict/fableARIMA.R",
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2 changes: 1 addition & 1 deletion catalog/summaries/Biological/Daily_Chlorophyll-a/models/fableETS.json
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"description": "fable package exponential smoothing model fable::ETS()",
"datetime": "2024-07-19T00:00:00Z",
"start_datetime": "2023-10-01T00:00:00Z",
"end_datetime": "2024-08-22T00:00:00Z",
"end_datetime": "2024-08-23T00:00:00Z",
"providers": [
{
"url": "https://github.com/melofton/vera4casts/blob/main/code/function_library/predict/fableETS.R",
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2 changes: 1 addition & 1 deletion catalog/summaries/Biological/Daily_Chlorophyll-a/models/fableNNETAR.json
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Expand Up @@ -18,7 +18,7 @@
"description": "autoregressive neural net fit using the NNETAR() function in the fable R package",
"datetime": "2024-07-19T00:00:00Z",
"start_datetime": "2023-10-01T00:00:00Z",
"end_datetime": "2024-08-22T00:00:00Z",
"end_datetime": "2024-08-23T00:00:00Z",
"providers": [
{
"url": "https://github.com/melofton/vera4casts/blob/main/code/function_library/predict/fableNNETAR.R",
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2 changes: 1 addition & 1 deletion catalog/summaries/Biological/Daily_Chlorophyll-a/models/glm_aed_v1.json
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Expand Up @@ -17,7 +17,7 @@
"description": "GLM-AED with Ensemble Kalman Filter as implemented in FLARE. This version used DA to update model states but not model parameters.",
"datetime": "2024-07-19T00:00:00Z",
"start_datetime": "2023-10-14T00:00:00Z",
"end_datetime": "2024-08-21T00:00:00Z",
"end_datetime": "2024-08-22T00:00:00Z",
"providers": [
{
"url": "https://github.com/FLARE-forecast/FCRE-forecast-code/blob/main/workflows/glm_aed/combined_run_aed.R",
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2 changes: 1 addition & 1 deletion catalog/summaries/Biological/Daily_Chlorophyll-a/models/historic_mean.json
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Expand Up @@ -18,7 +18,7 @@
"description": "Calculates the mean state from the historic timeseries and applies this to the forecast horizon. The model uses the fable R package MEAN() function to fit this model, with the uncertainty generated from the residuals of the fitted model.",
"datetime": "2024-07-19T00:00:00Z",
"start_datetime": "2024-02-06T00:00:00Z",
"end_datetime": "2024-08-21T00:00:00Z",
"end_datetime": "2024-08-22T00:00:00Z",
"providers": [
{
"url": "https://github.com/OlssonF/vera4cast/blob/main/R/fableMeanModelFunction.R",
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2 changes: 1 addition & 1 deletion catalog/summaries/Biological/Daily_Chlorophyll-a/models/monthly_mean.json
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"description": "This model calculates a monthly mean from the historic data and assigns this as the mean prediction for any day within that month. The standard deviation of the observations for that month is given as the standard deviation of the forecast.",
"datetime": "2024-07-19T00:00:00Z",
"start_datetime": "2024-02-06T00:00:00Z",
"end_datetime": "2024-08-23T00:00:00Z",
"end_datetime": "2024-08-24T00:00:00Z",
"providers": [
{
"url": "https://github.com/OlssonF/vera4cast/blob/main/R/MonthlyMeanModelFunction.R",
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2 changes: 1 addition & 1 deletion catalog/summaries/Biological/Daily_Chlorophyll-a/models/persistenceRW.json
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Expand Up @@ -18,7 +18,7 @@
"description": "Random walk from the fable package with ensembles used to represent uncertainty",
"datetime": "2024-07-19T00:00:00Z",
"start_datetime": "2023-10-01T00:00:00Z",
"end_datetime": "2024-08-21T00:00:00Z",
"end_datetime": "2024-08-22T00:00:00Z",
"providers": [
{
"url": "https://github.com/LTREB-reservoirs/vera4cast/blob/main/models/run_terrestrial_baselines.R",
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2 changes: 1 addition & 1 deletion catalog/summaries/Chemical/Daily_oxygen_concentration/collection.json
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"interval": [
[
"2023-10-14T00:00:00Z",
"2024-08-23T00:00:00Z"
"2024-08-24T00:00:00Z"
]
]
}
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2 changes: 1 addition & 1 deletion catalog/summaries/Chemical/Daily_oxygen_concentration/models/climatology.json
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Expand Up @@ -18,7 +18,7 @@
"description": "Historical DOY mean and sd. Assumes normal distribution",
"datetime": "2024-07-19T00:00:00Z",
"start_datetime": "2024-02-06T00:00:00Z",
"end_datetime": "2024-08-23T00:00:00Z",
"end_datetime": "2024-08-24T00:00:00Z",
"providers": [
{
"url": "https://github.com/LTREB-reservoirs/vera4cast/blob/main/models/run_terrestrial_baselines.R",
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2 changes: 1 addition & 1 deletion catalog/summaries/Chemical/Daily_oxygen_concentration/models/glm_aed_v1.json
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Expand Up @@ -17,7 +17,7 @@
"description": "GLM-AED with Ensemble Kalman Filter as implemented in FLARE. This version used DA to update model states but not model parameters.",
"datetime": "2024-07-19T00:00:00Z",
"start_datetime": "2023-10-14T00:00:00Z",
"end_datetime": "2024-08-21T00:00:00Z",
"end_datetime": "2024-08-22T00:00:00Z",
"providers": [
{
"url": "https://github.com/FLARE-forecast/FCRE-forecast-code/blob/main/workflows/glm_aed/combined_run_aed.R",
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2 changes: 1 addition & 1 deletion catalog/summaries/Chemical/Daily_oxygen_concentration/models/historic_mean.json
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"description": "Calculates the mean state from the historic timeseries and applies this to the forecast horizon. The model uses the fable R package MEAN() function to fit this model, with the uncertainty generated from the residuals of the fitted model.",
"datetime": "2024-07-19T00:00:00Z",
"start_datetime": "2024-02-06T00:00:00Z",
"end_datetime": "2024-08-21T00:00:00Z",
"end_datetime": "2024-08-22T00:00:00Z",
"providers": [
{
"url": "https://github.com/OlssonF/vera4cast/blob/main/R/fableMeanModelFunction.R",
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2 changes: 1 addition & 1 deletion catalog/summaries/Chemical/Daily_oxygen_concentration/models/monthly_mean.json
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Expand Up @@ -18,7 +18,7 @@
"description": "This model calculates a monthly mean from the historic data and assigns this as the mean prediction for any day within that month. The standard deviation of the observations for that month is given as the standard deviation of the forecast.",
"datetime": "2024-07-19T00:00:00Z",
"start_datetime": "2024-02-06T00:00:00Z",
"end_datetime": "2024-08-23T00:00:00Z",
"end_datetime": "2024-08-24T00:00:00Z",
"providers": [
{
"url": "https://github.com/OlssonF/vera4cast/blob/main/R/MonthlyMeanModelFunction.R",
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2 changes: 1 addition & 1 deletion catalog/summaries/Chemical/Daily_oxygen_concentration/models/persistenceRW.json
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Expand Up @@ -18,7 +18,7 @@
"description": "Random walk from the fable package with ensembles used to represent uncertainty",
"datetime": "2024-07-19T00:00:00Z",
"start_datetime": "2024-02-06T00:00:00Z",
"end_datetime": "2024-08-21T00:00:00Z",
"end_datetime": "2024-08-22T00:00:00Z",
"providers": [
{
"url": "https://github.com/LTREB-reservoirs/vera4cast/blob/main/models/run_terrestrial_baselines.R",
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2 changes: 1 addition & 1 deletion catalog/summaries/Physical/Daily_Secchi/collection.json
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Expand Up @@ -126,7 +126,7 @@
"interval": [
[
"2023-10-14T00:00:00Z",
"2024-08-23T00:00:00Z"
"2024-08-24T00:00:00Z"
]
]
}
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2 changes: 1 addition & 1 deletion catalog/summaries/Physical/Daily_Secchi/models/climatology.json
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Expand Up @@ -18,7 +18,7 @@
"description": "Historical DOY mean and sd. Assumes normal distribution",
"datetime": "2024-07-19T00:00:00Z",
"start_datetime": "2024-02-06T00:00:00Z",
"end_datetime": "2024-08-23T00:00:00Z",
"end_datetime": "2024-08-24T00:00:00Z",
"providers": [
{
"url": "https://github.com/LTREB-reservoirs/vera4cast/blob/main/models/run_terrestrial_baselines.R",
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2 changes: 1 addition & 1 deletion catalog/summaries/Physical/Daily_Secchi/models/glm_aed_v1.json
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Expand Up @@ -17,7 +17,7 @@
"description": "GLM-AED with Ensemble Kalman Filter as implemented in FLARE. This version used DA to update model states but not model parameters.",
"datetime": "2024-07-19T00:00:00Z",
"start_datetime": "2023-10-14T00:00:00Z",
"end_datetime": "2024-08-21T00:00:00Z",
"end_datetime": "2024-08-22T00:00:00Z",
"providers": [
{
"url": "https://github.com/FLARE-forecast/FCRE-forecast-code/blob/main/workflows/glm_aed/combined_run_aed.R",
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2 changes: 1 addition & 1 deletion catalog/summaries/Physical/Daily_Secchi/models/historic_mean.json
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Expand Up @@ -18,7 +18,7 @@
"description": "Calculates the mean state from the historic timeseries and applies this to the forecast horizon. The model uses the fable R package MEAN() function to fit this model, with the uncertainty generated from the residuals of the fitted model.",
"datetime": "2024-07-19T00:00:00Z",
"start_datetime": "2024-02-06T00:00:00Z",
"end_datetime": "2024-08-21T00:00:00Z",
"end_datetime": "2024-08-22T00:00:00Z",
"providers": [
{
"url": "https://github.com/OlssonF/vera4cast/blob/main/R/fableMeanModelFunction.R",
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2 changes: 1 addition & 1 deletion catalog/summaries/Physical/Daily_Secchi/models/monthly_mean.json
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Expand Up @@ -18,7 +18,7 @@
"description": "This model calculates a monthly mean from the historic data and assigns this as the mean prediction for any day within that month. The standard deviation of the observations for that month is given as the standard deviation of the forecast.",
"datetime": "2024-07-19T00:00:00Z",
"start_datetime": "2024-02-06T00:00:00Z",
"end_datetime": "2024-08-23T00:00:00Z",
"end_datetime": "2024-08-24T00:00:00Z",
"providers": [
{
"url": "https://github.com/OlssonF/vera4cast/blob/main/R/MonthlyMeanModelFunction.R",
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2 changes: 1 addition & 1 deletion catalog/summaries/Physical/Daily_Secchi/models/persistenceRW.json
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Expand Up @@ -18,7 +18,7 @@
"description": "Random walk from the fable package with ensembles used to represent uncertainty",
"datetime": "2024-07-19T00:00:00Z",
"start_datetime": "2024-02-06T00:00:00Z",
"end_datetime": "2024-08-21T00:00:00Z",
"end_datetime": "2024-08-22T00:00:00Z",
"providers": [
{
"url": "https://github.com/LTREB-reservoirs/vera4cast/blob/main/models/run_terrestrial_baselines.R",
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2 changes: 1 addition & 1 deletion catalog/summaries/Physical/Daily_Secchi/models/secchi_last3obs_mean.json
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"description": "This forecast simply takes the mean of the last three secchi observations and uses the standard deviation of that mean for the uncertainty around the forecast.",
"datetime": "2024-07-19T00:00:00Z",
"start_datetime": "2024-05-02T00:00:00Z",
"end_datetime": "2024-08-17T00:00:00Z",
"end_datetime": "2024-08-18T00:00:00Z",
"providers": [
{
"url": "https://github.com/kjkhoffman/vera4casts/blob/main/forecast_code/run_secchi_forecast.R",
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2 changes: 1 addition & 1 deletion catalog/summaries/Physical/Daily_Water_temperature/collection.json
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Expand Up @@ -146,7 +146,7 @@
"interval": [
[
"2023-09-21T00:00:00Z",
"2024-08-23T00:00:00Z"
"2024-08-24T00:00:00Z"
]
]
}
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2 changes: 1 addition & 1 deletion catalog/summaries/Physical/Daily_Water_temperature/models/climatology.json
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Expand Up @@ -19,7 +19,7 @@
"description": "Historical DOY mean and sd. Assumes normal distribution",
"datetime": "2024-07-19T00:00:00Z",
"start_datetime": "2023-09-21T00:00:00Z",
"end_datetime": "2024-08-23T00:00:00Z",
"end_datetime": "2024-08-24T00:00:00Z",
"providers": [
{
"url": "https://github.com/LTREB-reservoirs/vera4cast/blob/main/models/run_terrestrial_baselines.R",
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2 changes: 1 addition & 1 deletion catalog/summaries/Physical/Daily_Water_temperature/models/glm_aed_v1.json
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Expand Up @@ -17,7 +17,7 @@
"description": "GLM-AED with Ensemble Kalman Filter as implemented in FLARE. This version used DA to update model states but not model parameters.",
"datetime": "2024-07-19T00:00:00Z",
"start_datetime": "2023-10-14T00:00:00Z",
"end_datetime": "2024-08-21T00:00:00Z",
"end_datetime": "2024-08-22T00:00:00Z",
"providers": [
{
"url": "https://github.com/FLARE-forecast/FCRE-forecast-code/blob/main/workflows/glm_aed/combined_run_aed.R",
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2 changes: 1 addition & 1 deletion catalog/summaries/Physical/Daily_Water_temperature/models/historic_mean.json
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Expand Up @@ -19,7 +19,7 @@
"description": "Calculates the mean state from the historic timeseries and applies this to the forecast horizon. The model uses the fable R package MEAN() function to fit this model, with the uncertainty generated from the residuals of the fitted model.",
"datetime": "2024-07-19T00:00:00Z",
"start_datetime": "2024-02-06T00:00:00Z",
"end_datetime": "2024-08-21T00:00:00Z",
"end_datetime": "2024-08-22T00:00:00Z",
"providers": [
{
"url": "https://github.com/OlssonF/vera4cast/blob/main/R/fableMeanModelFunction.R",
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2 changes: 1 addition & 1 deletion catalog/summaries/Physical/Daily_Water_temperature/models/monthly_mean.json
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Expand Up @@ -19,7 +19,7 @@
"description": "This model calculates a monthly mean from the historic data and assigns this as the mean prediction for any day within that month. The standard deviation of the observations for that month is given as the standard deviation of the forecast.",
"datetime": "2024-07-19T00:00:00Z",
"start_datetime": "2024-02-06T00:00:00Z",
"end_datetime": "2024-08-23T00:00:00Z",
"end_datetime": "2024-08-24T00:00:00Z",
"providers": [
{
"url": "https://github.com/OlssonF/vera4cast/blob/main/R/MonthlyMeanModelFunction.R",
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2 changes: 1 addition & 1 deletion catalog/summaries/Physical/Daily_Water_temperature/models/persistenceRW.json
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"description": "Random walk from the fable package with ensembles used to represent uncertainty",
"datetime": "2024-07-19T00:00:00Z",
"start_datetime": "2023-09-21T00:00:00Z",
"end_datetime": "2024-08-21T00:00:00Z",
"end_datetime": "2024-08-22T00:00:00Z",
"providers": [
{
"url": "https://github.com/LTREB-reservoirs/vera4cast/blob/main/models/run_terrestrial_baselines.R",
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