Code

New ASPH H update algorithm#302

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jmikeowen merged 183 commits intodevelopLLNL/spheral:developfrom feature/ASPHv2LLNL/spheral:feature/ASPHv2Copy head branch name to clipboardOct 22, 2024

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Commits on Feb 27, 2024

• Generalizing hydros to allow user specification of custom smoothing

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Commits on Mar 1, 2024

• Screening TaylorImpact test to be skipped during debug build testing

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• Modifying (and simplifying) TableKernel to use QuadraticInterpolator

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• Updating tests with reference changes

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• Cleanup

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• Updating TableKernel unit test

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• Updating TensileRod reference data

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Commits on Mar 2, 2024

• One more test reference data update. It appears all tests are passing.

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• Loosening a tolerance for a test that intermittently fails (nothing to

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Commits on Mar 5, 2024

• Simplifying how we integrate for nperh reference lookups. Also

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• Reworked bisectRoot a bit, reinstantiating the y-tolerance for

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Commits on Mar 6, 2024

• Adding initialization methods for CubicHermiteInterpolator, to be

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Commits on Mar 8, 2024

• Adding a linear interpolator based on linear regression

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• Progress on SPH and ASPH ideal H

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• Restoring monotonicity to nperh(Wsum) lookups

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Commits on Mar 11, 2024

• Fixing a comment

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• Adding plots testing ASPH with different aspect ratios

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Commits on Mar 12, 2024

• Adding compiler guards

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• Checkpoint

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Commits on Mar 14, 2024

• Checkpoint on a crazy comb filter experiment

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Commits on Mar 18, 2024

• Extended interface for idealH in SmoothingScale methods to allow

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• Removing the temporary ASPHv2 object since we've folded that

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Commits on Mar 19, 2024

• More testing of the new ASPH ideas

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• Interface update

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Commits on Mar 21, 2024

• Changing default distribution method

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• Checkpoint -- we have to make a radical change for the ideal ASPH H,

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Commits on Mar 22, 2024

• Experimenting with a whole different ASPH idea based on extracting the

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Commits on Mar 25, 2024

• Adding ostream operator to Box1d

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Commits on Mar 26, 2024

• Checkpoint

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• Using Boost::Geometry for 2D convex hull

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• Protecting sqrt from generating a NaN

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• A differnt ASPH experiment using summation second moments again

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• Support for Vector2d natively in Boost::Geometryu

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Commits on Mar 28, 2024

• Replace redundant calculation with function call

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Commits on Mar 29, 2024

• Checkpoint

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• Trying an alternate way to work our transform directly on H rather

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Commits on Apr 2, 2024

• Checkpoint -- I believe our problem now is that we need to correct for

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Commits on Apr 15, 2024

• Checkpoint

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Commits on Apr 16, 2024

• Checkpoint

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• Checkpoint

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Commits on Apr 18, 2024

• Adding python bindings for bisectRoot

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• Checkpoint -- experimenting with RK

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Commits on Apr 24, 2024

• INITIAL changes to make smoothing scale advancement it's own Physics

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Commits on Apr 29, 2024

• Working though adding Python interface and changes for new independent

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Commits on May 6, 2024

• Getting more tests running with new smoothing scale package

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Commits on May 7, 2024

• Dodging deprecation warnings by judicious header inclusion

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Commits on May 8, 2024

• Working on a different convex hull approach to node volume selection

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Commits on May 9, 2024

• Looks like using the convex hull as an optimizing precursor to

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• Generalized our Boost::Geometry trait for GeomVector

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• Fiddling with different ways to measure the second moment

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Commits on May 13, 2024

• Got things running with the separate SmoothingScale physics

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Commits on May 14, 2024

• Changing nperh to match our kernel choice for the 2D Noh problem

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Commits on May 15, 2024

• Checkpoint

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• Merge branch 'bugfix/PalphaConstructor' into feature/ASPHv2

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• Order of ops for iteration startup

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• Checkpoint

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• Checkpoint

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Commits on May 16, 2024

• Merge branch 'develop' into feature/ASPHv2

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• Averaging in sqrt(psi) seems better than the psi directly

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• Making ASPH pure IntegrateH during a cycle, and only apply the IdealH

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• Experimenting with a crude artificial pair-wise pressure to push

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• Checkpoint

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Commits on May 20, 2024

• Experimenting with directly moving the points toward the local centroid

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Commits on May 22, 2024

• First stage getting the Voronoi cell geometry as a generic physics

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• Removing debug print

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• Boundary condition fixes -- seems to correct ASPH iterateIdealH

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Commits on May 23, 2024

• Very rough first cut at sub-point/cell pressure hourglass control

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• Implemented 2D subcell pressure HG control

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Commits on May 24, 2024

• Converting controller iterateIdealH to find and use the physics package

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• Starting to use cell center of mass rather than centroid for filtering

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Commits on May 28, 2024

• Better dummy MPI wrapper protection

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• Grabbing CellFaceFlags

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Commits on Jun 6, 2024

• Making node pair hashing independent of order (i,j <-> j,i)

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• Switched to HG forces acting pairwise rather than internal to points. 1D results look good with subpoint hourglass control on.

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Commits on Jun 7, 2024

• Implementing 2D triangular sub-cell corrections

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• Making 2D & 3D Voronoi geometries return full CellFaceFlags

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• Allowing more interpolation kernels for 1D Sod test

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• Moving Voronoi geometry calculation to start of step, which is

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• Fixing operator<<(Box1d)

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• Fixing compiler guard

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• Trying to figure out handing parallel correctly for subpoint pressures

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Commits on Jun 12, 2024

• Adding logic to clip polytopes for reflecting boundary enforcement

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• Spelling

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• Checkpoint working on pair-wise HG forces

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• Merge branch 'develop' into feature/ASPHv2

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• Fixes from merging with develop

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• Another develop merge bugfix

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Commits on Jun 27, 2024

• Merge branch 'develop' into feature/ASPHv2

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• Fixed one problem with Voronoi cells building during the step related

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Commits on Jun 28, 2024

• We messed up by a factor of the mass. This isn't right yet, but closer.

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Commits on Jul 19, 2024

• Merge branch 'develop' into feature/ASPHv2

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Commits on Jul 20, 2024

• Catching up with Landon's changes

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Commits on Jul 22, 2024

• Sorted some problems for serial/no ghost points runs with the new

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Commits on Jul 23, 2024

• Merge branch 'develop' into feature/ASPHv2

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Commits on Jul 24, 2024

• Working on our targeted test for hourglass filtering (1D)

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Commits on Jul 25, 2024

• Adding time step control for hourglass pressure filter

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• More testing

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Commits on Jul 26, 2024

• Found the latest problem with energy conservation

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Commits on Jul 29, 2024

• Gah! Bug in ASPH H algorithm smoothing

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• Changing reference pressure for HG control, but not affecting ASPH Noh

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• Defaulting to WendlandC4 kernel

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• Implemented 3D filter sub-pressures, and adding option to do direct

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Commits on Jul 30, 2024

• Fixing a mysterious thread problem with ASPH

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• Changing a deffault

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Commits on Jul 31, 2024

• Merge branch 'develop' into feature/ASPHv2

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Commits on Aug 1, 2024

• Fiddling with the direct centroidal motion option

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Commits on Aug 5, 2024

• Learned a few things with a 2D hourglass direct test

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Commits on Aug 7, 2024

• Renaming filter->xfilter in script

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Commits on Aug 9, 2024

• Cleaned up some unnecessary variables/storage for the compatible energy mode

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Commits on Aug 10, 2024

• Implementing 3D second-moment for tetrahedra and cleaning up warnings

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• Test update with new smoothing scale algorithm interface

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Commits on Aug 12, 2024

• Test updates

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Commits on Aug 13, 2024

• Fixing more tests (including a few actual problems)

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• Contract bug fix

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• Updates for new smoothing scale physics interface

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• Test updates with new interface

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• More test fixes

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• DEM fixes

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• Test updates

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Commits on Aug 16, 2024

• Checkpoint

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• CubicHermiteInterpolator now uses a solve for the gradient values if not provided. Also made tests more robust.

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• Test updates with modified CubicHermiteInterpolator

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Commits on Aug 20, 2024

• Debugged a tolerance issue with ANEOS

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Commits on Aug 21, 2024

• Merge branch 'develop' into feature/ASPHv2

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• Fixing compile warnings

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• Cleaning up CLANG warnings. Also turning on warnings as errors for clang in the CI.

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• Test robustness fix

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Commits on Aug 22, 2024

• Cleaned up clang warnings for optimized build

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• Fixing clang treat warnings as errors flag for CI

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• Physics::postStateUpdate now returns a bool indicating if boundary conditions should be applied

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Commits on Sep 4, 2024

• Adding compiler flags to help building on IBM blueos

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• Testing tolerance for BlueOS slightly different on Tensile Rod test

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Commits on Sep 11, 2024

• - Cleaned up ASPH implementation, removing unused code and variables.

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• Merge branch 'develop' into feature/ASPHv2

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• Making test robust with random seeds (and a few other improvements)

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• Added missing Python bindings

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Commits on Sep 13, 2024

• Moving -fvar-tracking-assignments-toggle to be on for PYB11 builds on all GCC builds to avoid symbols overflows during compilation

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Commits on Sep 18, 2024

• Changing -fvar-tracking-assignments-toggle to -fno-var-tracking-assignments which is explicitly what we want for PYB11 targets

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Commits on Sep 19, 2024

• Updating Spheral Release notes

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Commits on Sep 20, 2024

• Adding more flexibility to the IdealH user override functor in the ASPH object

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Commits on Sep 23, 2024

• Fixed some problems with the initial iterateIdealH. Also adding a

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Commits on Sep 24, 2024

• Simplified test

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• Add script that generates integrator test values

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• Updated H values

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• Update H values

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Commits on Sep 25, 2024

• Test fix for new ideal H

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• Test fix for CRK Taylor-anvil test

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• Moving our polytope second moment integration methods to standalone

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Commits on Sep 27, 2024

• Fixes for hradial in the case where we have extreme aspect

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• Removing volume weighting from Voronoi cell generation for now

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• In 2D aligning void clip points with H tensor if it is not round.

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• Cleaning up a lot of unused code -- also applying any user H filter to

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• Merge branch 'develop' into feature/ASPHv2

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Commits on Sep 30, 2024

• Fixing install logic for ENABLE_DEV_BUILD when building individual packages

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• Bugfix for RZ CRKSPH with compatible energy update

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• Fix for applying user filter to H whether we're using IdealH or not

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• Updating RELEASE_NOTES

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• Getting rid of a debugging hack I didn't intend to check in

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• Adding a unit test of eigenvalue & eigenvectors for 2D

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• Fixing the void point H alignment logic

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Commits on Oct 3, 2024

• Setting only rank 0 to show the "Spheral>" prompt by default

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• Merge branch 'develop' into feature/ASPHv2

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Commits on Oct 4, 2024

• Merge branch 'feature/bassett4/integrator-test' of github.com:LLNL/spheral into feature/ASPHv2

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• Merge branch 'bugfix/correct_enable_dev_build' of github.com:LLNL/spheral into feature/ASPHv2

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• Gotta initialize packages before calling iterateIdealH.

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• Updating TestIntegrator reference values using Brody's Mathematica script

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• Loosening this contract tolerance to make more robust. We're pushing

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• Random seed tweak

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Commits on Oct 7, 2024

• Adding specialized ASPH H advance options (fixShape and radialOnly),

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Commits on Oct 8, 2024

• Cleaning up how we generate random numbers in our testing

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• Merge branch 'bugfix/correct_enable_dev_build' into feature/ASPHv2

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• Fixing some testing precision problems on IBM Power

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Commits on Oct 9, 2024

• Improving radialOnly option for ASPH. Added expected analytic evolution in the

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• Turns out in real problems this iterateIdealH shifting between radialOnly and fixShape doesn't work well

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Commits on Oct 10, 2024

• Adding ability to override radial geometry for radialOnly option in ASPH

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Commits on Oct 14, 2024

• Merge branch 'develop' into feature/ASPHv2

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Commits on Oct 16, 2024

• Merge branch 'develop' into feature/ASPHv2

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• Switching ENABLE_DEV_BUILD in CI testing to TOSS4 clang

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Commits on Oct 17, 2024

• Removing redundant boundary condition calls in FSISPH::postStateUpdate

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• Removed all toss3 info from configurations, changed blue os gcc version from 8.3.1 to 10.3.1 everywhere

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• Fixed [email protected] to [email protected] and added proper spectrum mpi prefix to blueos package file

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Commits on Oct 18, 2024

• Add cuda 11.4.1 with unsupported compilers

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Commits on Oct 22, 2024

• Bring blueos gcc version back to 8.3.1

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