Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

[BlockSparseArrays] More general broadcasting and slicing #1332

Merged
merged 19 commits into from
Mar 22, 2024
Merged
Show file tree
Hide file tree
Changes from all commits
Commits
File filter

Filter by extension

Filter by extension

Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
Original file line number Diff line number Diff line change
@@ -1,26 +1,74 @@
@eval module $(gensym())
using Compat: Returns
using Test: @test, @testset, @test_broken
using BlockArrays: Block, blocksize
using NDTensors.BlockSparseArrays: BlockSparseArray
using NDTensors.GradedAxes: gradedrange
using NDTensors.BlockSparseArrays: BlockSparseArray, block_nstored
using NDTensors.GradedAxes: GradedUnitRange, gradedrange
using NDTensors.LabelledNumbers: label
using NDTensors.Sectors: U1
using NDTensors.SparseArrayInterface: nstored
using NDTensors.TensorAlgebra: fusedims, splitdims
using Random: randn!
function blockdiagonal!(f, a::AbstractArray)
for i in 1:minimum(blocksize(a))
b = Block(ntuple(Returns(i), ndims(a)))
a[b] = f(a[b])
end
return a
end
const elts = (Float32, Float64, Complex{Float32}, Complex{Float64})
@testset "BlockSparseArraysGradedAxesExt (eltype=$elt)" for elt in elts
d1 = gradedrange([U1(0) => 1, U1(1) => 1])
d2 = gradedrange([U1(1) => 1, U1(0) => 1])
a = BlockSparseArray{elt}(d1, d2, d1, d2)
for i in 1:minimum(blocksize(a))
b = Block(i, i, i, i)
a[b] = randn!(a[b])
@testset "map" begin
d1 = gradedrange([U1(0) => 2, U1(1) => 2])
d2 = gradedrange([U1(0) => 2, U1(1) => 2])
a = BlockSparseArray{elt}(d1, d2, d1, d2)
blockdiagonal!(randn!, a)

for b in (a + a, 2 * a)
@test size(b) == (4, 4, 4, 4)
@test blocksize(b) == (2, 2, 2, 2)
@test nstored(b) == 32
@test block_nstored(b) == 2
# TODO: Have to investigate why this fails
# on Julia v1.6, or drop support for v1.6.
for i in 1:ndims(a)
@test axes(b, i) isa GradedUnitRange
end
@test label(axes(b, 1)[Block(1)]) == U1(0)
@test label(axes(b, 1)[Block(2)]) == U1(1)
@test Array(a) isa Array{elt}
@test Array(a) == a
@test 2 * Array(a) == b
end

b = a[2:3, 2:3, 2:3, 2:3]
@test size(b) == (2, 2, 2, 2)
@test blocksize(b) == (2, 2, 2, 2)
@test nstored(b) == 2
@test block_nstored(b) == 2
for i in 1:ndims(a)
@test axes(b, i) isa GradedUnitRange
end
@test label(axes(b, 1)[Block(1)]) == U1(0)
@test label(axes(b, 1)[Block(2)]) == U1(1)
@test Array(a) isa Array{elt}
@test Array(a) == a
end
# TODO: Add tests for various slicing operations.
@testset "fusedims" begin
d1 = gradedrange([U1(0) => 1, U1(1) => 1])
d2 = gradedrange([U1(0) => 1, U1(1) => 1])
a = BlockSparseArray{elt}(d1, d2, d1, d2)
blockdiagonal!(randn!, a)
m = fusedims(a, (1, 2), (3, 4))
@test axes(m, 1) isa GradedUnitRange
@test axes(m, 2) isa GradedUnitRange
@test a[1, 1, 1, 1] == m[1, 1]
@test a[2, 2, 2, 2] == m[4, 4]
# TODO: Current `fusedims` doesn't merge
# common sectors, need to fix.
@test_broken blocksize(m) == (3, 3)
@test a == splitdims(m, (d1, d2), (d1, d2))
end
m = fusedims(a, (1, 2), (3, 4))
@test a[1, 1, 1, 1] == m[2, 2]
@test a[2, 2, 2, 2] == m[3, 3]
# TODO: Current `fusedims` doesn't merge
# common sectors, need to fix.
@test_broken blocksize(m) == (3, 3)
@test a == splitdims(m, (d1, d2), (d1, d2))
end
end
Original file line number Diff line number Diff line change
@@ -1,7 +1,48 @@
using BlockArrays: AbstractBlockArray, AbstractBlockVector, Block, blockedrange
using BlockArrays:
BlockArrays,
AbstractBlockArray,
AbstractBlockVector,
Block,
BlockRange,
BlockedUnitRange,
BlockVector,
block,
blockaxes,
blockedrange,
blockindex,
blocks,
findblock,
findblockindex
using Compat: allequal
using Dictionaries: Dictionary, Indices
using ..GradedAxes: blockedunitrange_getindices
using ..SparseArrayInterface: stored_indices

# Outputs a `BlockUnitRange`.
function sub_axis(a::AbstractUnitRange, indices)
return error("Not implemented")
end

# TODO: Use `GradedAxes.blockedunitrange_getindices`.
# Outputs a `BlockUnitRange`.
function sub_axis(a::AbstractUnitRange, indices::AbstractUnitRange)
return only(axes(blockedunitrange_getindices(a, indices)))
end

# TODO: Use `GradedAxes.blockedunitrange_getindices`.
# Outputs a `BlockUnitRange`.
function sub_axis(a::AbstractUnitRange, indices::AbstractVector{<:Block})
return blockedrange([length(a[index]) for index in indices])
end

# TODO: Use `GradedAxes.blockedunitrange_getindices`.
# TODO: Merge blocks.
function sub_axis(a::AbstractUnitRange, indices::BlockVector{<:Block})
# `collect` is needed here, otherwise a `PseudoBlockVector` is
# constructed.
return blockedrange([length(a[index]) for index in collect(indices)])
end

# TODO: Use `Tuple` conversion once
# BlockArrays.jl PR is merged.
block_to_cartesianindex(b::Block) = CartesianIndex(b.n)
Expand Down Expand Up @@ -38,3 +79,110 @@ end
function block_reshape(a::AbstractArray, axes::Vararg{AbstractUnitRange})
return block_reshape(a, axes)
end

function cartesianindices(axes::Tuple, b::Block)
return CartesianIndices(ntuple(dim -> axes[dim][Tuple(b)[dim]], length(axes)))
end

# Get the range within a block.
function blockindexrange(axis::AbstractUnitRange, r::UnitRange)
bi1 = findblockindex(axis, first(r))
bi2 = findblockindex(axis, last(r))
b = block(bi1)
# Range must fall within a single block.
@assert b == block(bi2)
i1 = blockindex(bi1)
i2 = blockindex(bi2)
return b[i1:i2]
end

function blockindexrange(
axes::Tuple{Vararg{AbstractUnitRange,N}}, I::CartesianIndices{N}
) where {N}
brs = blockindexrange.(axes, I.indices)
b = Block(block.(brs))
rs = map(br -> only(br.indices), brs)
return b[rs...]
end

function blockindexrange(a::AbstractArray, I::CartesianIndices)
return blockindexrange(axes(a), I)
end

# Get the blocks the range spans across.
function blockrange(axis::AbstractUnitRange, r::UnitRange)
return findblock(axis, first(r)):findblock(axis, last(r))
end

function blockrange(axis::AbstractUnitRange, r::Int)
error("Slicing with integer values isn't supported.")
return findblock(axis, r)
end

function blockrange(axis::AbstractUnitRange, r::AbstractVector{<:Block{1}})
for b in r
@assert b ∈ blockaxes(axis, 1)
end
return r
end

using BlockArrays: BlockSlice
function blockrange(axis::AbstractUnitRange, r::BlockSlice)
return blockrange(axis, r.block)
end

function blockrange(axis::AbstractUnitRange, r)
return error("Slicing not implemented for range of type `$(typeof(r))`.")
end

function cartesianindices(a::AbstractArray, b::Block)
return cartesianindices(axes(a), b)
end

# Output which blocks of `axis` are contained within the unit range `range`.
# The start and end points must match.
function findblocks(axis::AbstractUnitRange, range::AbstractUnitRange)
# TODO: Add a test that the start and end points of the ranges match.
return findblock(axis, first(range)):findblock(axis, last(range))
end

function block_stored_indices(a::AbstractArray)
return Block.(Tuple.(stored_indices(blocks(a))))
end

_block(indices) = block(indices)
_block(indices::CartesianIndices) = Block(ntuple(Returns(1), ndims(indices)))

function combine_axes(as::Vararg{Tuple})
@assert allequal(length.(as))
ndims = length(first(as))
return ntuple(ndims) do dim
dim_axes = map(a -> a[dim], as)
return reduce(BlockArrays.combine_blockaxes, dim_axes)
end
end

# Returns `BlockRange`
# Convert the block of the axes to blocks of the subaxes.
function subblocks(axes::Tuple, subaxes::Tuple, block::Block)
@assert length(axes) == length(subaxes)
return BlockRange(
ntuple(length(axes)) do dim
findblocks(subaxes[dim], axes[dim][Tuple(block)[dim]])
end,
)
end

# Returns `Vector{<:Block}`
function subblocks(axes::Tuple, subaxes::Tuple, blocks)
return mapreduce(vcat, blocks; init=eltype(blocks)[]) do block
return vec(subblocks(axes, subaxes, block))
end
end

# Returns `Vector{<:CartesianIndices}`
function blocked_cartesianindices(axes::Tuple, subaxes::Tuple, blocks)
return map(subblocks(axes, subaxes, blocks)) do block
return cartesianindices(subaxes, block)
end
end
Original file line number Diff line number Diff line change
@@ -1,5 +1,11 @@
using BlockArrays: AbstractBlockArray, BlocksView
using ..SparseArrayInterface: SparseArrayInterface, nstored

function SparseArrayInterface.nstored(a::AbstractBlockArray)
return sum(b -> nstored(b), blocks(a); init=zero(Int))
end

# TODO: Handle `BlocksView` wrapping a sparse array?
function SparseArrayInterface.storage_indices(a::BlocksView)
return CartesianIndices(a)
end
2 changes: 2 additions & 0 deletions NDTensors/src/lib/BlockSparseArrays/src/BlockSparseArrays.jl
Original file line number Diff line number Diff line change
Expand Up @@ -3,10 +3,12 @@ include("blocksparsearrayinterface/blocksparsearrayinterface.jl")
include("blocksparsearrayinterface/linearalgebra.jl")
include("blocksparsearrayinterface/blockzero.jl")
include("blocksparsearrayinterface/broadcast.jl")
include("blocksparsearrayinterface/arraylayouts.jl")
include("abstractblocksparsearray/abstractblocksparsearray.jl")
include("abstractblocksparsearray/wrappedabstractblocksparsearray.jl")
include("abstractblocksparsearray/abstractblocksparsematrix.jl")
include("abstractblocksparsearray/abstractblocksparsevector.jl")
include("abstractblocksparsearray/view.jl")
include("abstractblocksparsearray/arraylayouts.jl")
include("abstractblocksparsearray/sparsearrayinterface.jl")
include("abstractblocksparsearray/linearalgebra.jl")
Expand Down
Original file line number Diff line number Diff line change
Expand Up @@ -14,25 +14,26 @@ Base.axes(::AbstractBlockSparseArray) = error("Not implemented")

blockstype(::Type{<:AbstractBlockSparseArray}) = error("Not implemented")

# Specialized in order to fix ambiguity error with `BlockArrays`.
## # Specialized in order to fix ambiguity error with `BlockArrays`.
function Base.getindex(a::AbstractBlockSparseArray{<:Any,N}, I::Vararg{Int,N}) where {N}
return blocksparse_getindex(a, I...)
end

# Fix ambiguity error with `BlockArrays`.
function Base.getindex(a::AbstractBlockSparseArray{<:Any,N}, I::Block{N}) where {N}
return ArrayLayouts.layout_getindex(a, I)
end

# Fix ambiguity error with `BlockArrays`.
function Base.getindex(a::AbstractBlockSparseArray{<:Any,1}, I::Block{1})
return ArrayLayouts.layout_getindex(a, I)
end

# Fix ambiguity error with `BlockArrays`.
function Base.getindex(a::AbstractBlockSparseArray, I::Vararg{AbstractVector})
return blocksparse_getindex(a, I...)
end
## # Fix ambiguity error with `BlockArrays`.
## function Base.getindex(a::AbstractBlockSparseArray{<:Any,N}, I::Block{N}) where {N}
## return ArrayLayouts.layout_getindex(a, I)
## end
##
## # Fix ambiguity error with `BlockArrays`.
## function Base.getindex(a::AbstractBlockSparseArray{<:Any,1}, I::Block{1})
## return ArrayLayouts.layout_getindex(a, I)
## end
##
## # Fix ambiguity error with `BlockArrays`.
## function Base.getindex(a::AbstractBlockSparseArray, I::Vararg{AbstractVector})
## ## return blocksparse_getindex(a, I...)
## return ArrayLayouts.layout_getindex(a, I...)
## end

# Specialized in order to fix ambiguity error with `BlockArrays`.
function Base.setindex!(
Expand Down
Original file line number Diff line number Diff line change
@@ -1,10 +1,9 @@
using ArrayLayouts: ArrayLayouts, MemoryLayout, MatMulMatAdd, MulAdd
using ArrayLayouts: ArrayLayouts, MemoryLayout, MulAdd
using BlockArrays: BlockLayout
using ..SparseArrayInterface: SparseLayout
using LinearAlgebra: mul!

# TODO: Generalize to `BlockSparseArrayLike`.
function ArrayLayouts.MemoryLayout(arraytype::Type{<:AbstractBlockSparseArray})
function ArrayLayouts.MemoryLayout(arraytype::Type{<:BlockSparseArrayLike})
outer_layout = typeof(MemoryLayout(blockstype(arraytype)))
inner_layout = typeof(MemoryLayout(blocktype(arraytype)))
return BlockLayout{outer_layout,inner_layout}()
Expand All @@ -16,14 +15,9 @@ function Base.similar(
return similar(BlockSparseArray{elt}, axes)
end

function ArrayLayouts.materialize!(
m::MatMulMatAdd{
<:BlockLayout{<:SparseLayout},
<:BlockLayout{<:SparseLayout},
<:BlockLayout{<:SparseLayout},
},
)
α, a1, a2, β, a_dest = m.α, m.A, m.B, m.β, m.C
mul!(a_dest, a1, a2, α, β)
# Materialize a SubArray view.
function ArrayLayouts.sub_materialize(layout::BlockLayout{<:SparseLayout}, a, axes)
a_dest = BlockSparseArray{eltype(a)}(axes)
a_dest .= a
return a_dest
end
Original file line number Diff line number Diff line change
@@ -1,5 +1,48 @@
using BlockArrays: BlockedUnitRange, BlockSlice
using Base.Broadcast: Broadcast

function Broadcast.BroadcastStyle(arraytype::Type{<:BlockSparseArrayLike})
return BlockSparseArrayStyle{ndims(arraytype)}()
end

# Fix ambiguity error with `BlockArrays`.
function Broadcast.BroadcastStyle(
arraytype::Type{
<:SubArray{
<:Any,
<:Any,
<:AbstractBlockSparseArray,
<:Tuple{BlockSlice{<:Any,<:BlockedUnitRange},Vararg{Any}},
},
},
)
return BlockSparseArrayStyle{ndims(arraytype)}()
end
function Broadcast.BroadcastStyle(
arraytype::Type{
<:SubArray{
<:Any,
<:Any,
<:AbstractBlockSparseArray,
<:Tuple{
BlockSlice{<:Any,<:BlockedUnitRange},
BlockSlice{<:Any,<:BlockedUnitRange},
Vararg{Any},
},
},
},
)
return BlockSparseArrayStyle{ndims(arraytype)}()
end
function Broadcast.BroadcastStyle(
arraytype::Type{
<:SubArray{
<:Any,
<:Any,
<:AbstractBlockSparseArray,
<:Tuple{Any,BlockSlice{<:Any,<:BlockedUnitRange},Vararg{Any}},
},
},
)
return BlockSparseArrayStyle{ndims(arraytype)}()
end
Loading
Loading