Pass custom IC map to Semsimian through CLI

[caufieldjh]

No description provided.

[caufieldjh]

See also monarch-initiative/semsimian#127 - if Semsimian encounters an error in parsing the provided IC map, it will raise an error but continue.

[caufieldjh]

Something like the following should now work:

runoak -vvv -i semsimian:sqlite:obo:phenio similarity --no-autolabel -p i -O csv -o HP_vs_HP_semsimian_test.tsv --min-ancestor-information-content 5 --information-content-file test_ic.tsv HP:0000118 @ HP:0000119 

with test_ic_.tsv containing just two columns, like so:

HP:0000118  5.5
HP:0000119  6.5

[codecov-commenter]

Codecov Report

Attention: Patch coverage is 72.41379% with 8 lines in your changes are missing coverage. Please review.

Project coverage is 75.17%. Comparing base (509d9ec) to head (97e574f).
Report is 7 commits behind head on main.

Files	Patch %	Lines
src/oaklib/cli.py	14.28%	6 Missing ⚠️
...t_implementations/test_semsimian_implementation.py	89.47%	2 Missing ⚠️

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Additional details and impacted files

@@            Coverage Diff             @@
##             main     #759      +/-   ##
==========================================
+ Coverage   75.16%   75.17%   +0.01%     
==========================================
  Files         278      278              
  Lines       32767    32796      +29     
==========================================
+ Hits        24629    24655      +26     
- Misses       8138     8141       +3     

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