Merge pull request #126 from HiPCTProject/rm-inventory

Remove inventory and associated code
HiPCTProject · Aug 13, 2024 · 801e22d · 801e22d
2 parents 14002c7 + 4c11608
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diff --git a/README.md b/README.md
@@ -8,11 +8,6 @@
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diff --git a/docs/index.rst b/docs/index.rst
@@ -3,13 +3,13 @@ hipct-reg
 
 Code for registering high-resolution HiP-CT region of interest datasets to low-resolution HiP-CT full-organ datasets.
 
-This package contains the image registration code, and helpers for keeping an inventory of registered data and doing the registrations for HiP-CT data.
-It is designed to be used internally by the HiP-CT team, but publicly released so our registrations are reproducible and in case anyone else finds the code helpful.
+This package contains the image registration code.
+Helpers for keeping an inventory of registered data and doing the registrations for HiP-CT data are in the (private) ``hipct-data-tools`` repository.
+This package designed to be used internally by the HiP-CT team, but publicly released so our registrations are reproducible and in case anyone else finds the code helpful.
 
 Contents
 --------
 
-- :doc:`new_datasets`: A step-by-step guide for running registrations on new HiP-CT datasets.
 - :doc:`auto_examples/tutorial`: A lower level tutorial showing how to use the registratino code from Python.
 - :doc:`guide`: An explanation of how the registration pipeline works.
 - :doc:`api`: API reference for different bits of the registration pipeline.
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-   new_datasets
    auto_examples/tutorial
    guide
    api
diff --git a/docs/new_datasets.rst b/docs/new_datasets.rst
diff --git a/scripts/gen_common_point_spreadsheet.py b/scripts/gen_common_point_spreadsheet.py
diff --git a/scripts/neuroglancer_link.py b/scripts/neuroglancer_link.py
diff --git a/scripts/read_common_point_spreadsheet.py b/scripts/read_common_point_spreadsheet.py