Update Instrument File Processing Functions #153
Workflow file for this run
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| # This workflow will install Python dependencies, run tests, run linting, and test building docs | |
| name: Testing | |
| on: | |
| push: | |
| branches: | |
| - main | |
| pull_request: | |
| branches: | |
| - main | |
| workflow_dispatch: # For on demand runs | |
| schedule: | |
| - cron: 0 0 * * * # Scheduled run every day at midnight | |
| jobs: | |
| build: | |
| runs-on: ${{ matrix.platform }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| platform: [ubuntu-latest, macos-latest, windows-latest] | |
| python-version: [3.9, '3.10', '3.11'] | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v2 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install dependencies | |
| run: | | |
| pip install pip setuptools wheel --upgrade | |
| # Install spacepy without build isolation to avoid issues with numpy | |
| pip install numpy | |
| pip install spacepy --no-build-isolation | |
| pip install -e .[test] | |
| if: ${{ !(matrix.platform == 'windows-latest' && matrix.python-version == '3.11') }} | |
| - name: Install CDF library on Ubuntu | |
| run: | | |
| wget https://sdc-aws-support.s3.amazonaws.com/cdf-binaries/latest.zip | |
| unzip latest.zip | |
| echo "CDF_LIB=cdf/lib" >> $GITHUB_ENV | |
| if: ${{(matrix.platform == 'ubuntu-latest')}} | |
| - name: Install CDF library on MacOS | |
| run: | | |
| wget https://spdf.gsfc.nasa.gov/pub/software/cdf/dist/cdf39_0/macosx/CDF3_9_0-binary-signed.pkg | |
| sudo installer -pkg CDF3_9_0-binary-signed.pkg -target / | |
| ls -l | |
| echo "CDF_LIB=cdf/lib" >> $GITHUB_ENV | |
| if: ${{(matrix.platform == 'macos-latest')}} | |
| # Set up CDF and run tests on Windows | |
| - name: Install CDF on Windows | |
| shell: cmd | |
| run: | | |
| # Download and unzip CDF | |
| curl -L "https://spdf.gsfc.nasa.gov/pub/software/cdf/dist/latest/windows/cdf3.9.0_64bit_WinZip_Installer.zip" --output cdf.zip | |
| mkdir cdf_lib | |
| tar -xf cdf.zip -C cdf_lib | |
| # Set environment variables for CDF | |
| set mydir=%cd% | |
| set CDF_BASE=%mydir%\cdf_lib | |
| set CDF_INC=%mydir%\cdf_lib\include | |
| set CDF_LIB=%mydir%\cdf_lib\lib | |
| set CDF_HELP=%mydir%\cdf_lib\help | |
| set CDF_LEAPSECONDSTABLE=%mydir%\cdf_lib\CDFLeapSeconds.txt | |
| set CLASSPATH=%mydir%\cdf_lib\CDFToolsDriver.jar;%mydir%\cdf_lib\lib\cdfjava.jar;%mydir%\cdf_lib\lib\cdfml.jar;%mydir%\cdf_lib\lib\cdfjson.jar;%mydir%\cdf_lib\lib\cdfj.jar;%mydir%\cdf_lib\lib\gson-2.8.6.jar;%mydir%\cdf_lib\lib\javax.json-1.0.4.jar;. | |
| set PATH=%mydir%\cdf_lib;%mydir%\cdf_lib\bin;%PATH% | |
| set TERMINFO=%mydir%\cdf_lib\lib\terminfo | |
| set JAVA_TOOL_OPTIONS="-Dfile.encoding=UTF8" | |
| # Run tests | |
| pytest --pyargs hermes_eea --cov hermes_eea | |
| # Skip Windows Python 3.11 tests until SpacePy is updated | |
| if: ${{(matrix.platform == 'windows-latest' && matrix.python-version != '3.11')}} | |
| - name: Run tests on Ubuntu and MacOS | |
| run: pytest --pyargs hermes_eea --cov hermes_eea | |
| env: | |
| PLATFORM: ${{ matrix.platform }} | |
| if: ${{ !(matrix.platform == 'windows-latest') }} | |
| - name: Upload coverage reports to Codecov with GitHub Action | |
| uses: codecov/codecov-action@v3 | |
| # Skip Windows Python 3.11 tests until SpacePy is updated | |
| if: ${{ !(matrix.platform == 'windows-latest' && matrix.python-version == '3.11') }} |