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jreadey committed Dec 27, 2024
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12 changes: 8 additions & 4 deletions docs/Makefile
Original file line number Diff line number Diff line change
@@ -1,4 +1,5 @@
# Makefile for Sphinx documentation
#

# You can set these variables from the command line.
SPHINXOPTS = -W
Expand Down Expand Up @@ -84,17 +85,17 @@ qthelp:
@echo
@echo "Build finished; now you can run "qcollectiongenerator" with the" \
".qhcp project file in $(BUILDDIR)/qthelp, like this:"
@echo "# qcollectiongenerator $(BUILDDIR)/qthelp/h5py.qhcp"
@echo "# qcollectiongenerator $(BUILDDIR)/qthelp/h5pyd.qhcp"
@echo "To view the help file:"
@echo "# assistant -collectionFile $(BUILDDIR)/qthelp/h5py.qhc"
@echo "# assistant -collectionFile $(BUILDDIR)/qthelp/h5pyd.qhc"

devhelp:
$(SPHINXBUILD) -b devhelp $(ALLSPHINXOPTS) $(BUILDDIR)/devhelp
@echo
@echo "Build finished."
@echo "To view the help file:"
@echo "# mkdir -p $$HOME/.local/share/devhelp/h5py"
@echo "# ln -s $(BUILDDIR)/devhelp $$HOME/.local/share/devhelp/h5py"
@echo "# mkdir -p $$HOME/.local/share/devhelp/h5pyd"
@echo "# ln -s $(BUILDDIR)/devhelp $$HOME/.local/share/devhelp/h5pyd"
@echo "# devhelp"

epub:
Expand Down Expand Up @@ -174,3 +175,6 @@ pseudoxml:
$(SPHINXBUILD) -b pseudoxml $(ALLSPHINXOPTS) $(BUILDDIR)/pseudoxml
@echo
@echo "Build finished. The pseudo-XML files are in $(BUILDDIR)/pseudoxml."

show:
@python -m webbrowser -t "file://$(shell pwd)/_build/html/index.html"
174 changes: 133 additions & 41 deletions docs/conf.py
Original file line number Diff line number Diff line change
@@ -1,125 +1,138 @@
# -*- coding: utf-8 -*-
#
# h5pyd documentation build configuration file,
#
# This file is execfile()d with the current directory set to its
# containing dir.
#
# Note that not all possible configuration values are present in this
# autogenerated file.
#
# All configuration values have a default; values that are commented out
# serve to show the default.

import sys
import os
from importlib import metadata

# If extensions (or modules to document with autodoc) are in another directory,
# add these directories to sys.path here. If the directory is relative to the
# documentation root, use os.path.abspath to make it absolute, like shown here.
# sys.path.insert(0, os.path.abspath('.'))
#sys.path.insert(0, os.path.abspath('.'))

# -- General configuration ------------------------------------------------

# If your documentation needs a minimal Sphinx version, state it here.
# needs_sphinx = '1.0'
#needs_sphinx = '1.0'

# Add any Sphinx extension module names here, as strings. They can be
# extensions coming with Sphinx (named 'sphinx.ext.*') or your custom
# ones.
extensions = [
'sphinx.ext.intersphinx',
'sphinx.ext.extlinks',
'sphinx.ext.mathjax',
'sphinx.ext.intersphinx',
'sphinx.ext.extlinks',
'sphinx.ext.mathjax',
]

# intersphinx_mapping = {'low': ('https://api.h5py.org', None)}
intersphinx_mapping = {'low': ('https://api.h5py.org', None)}

extlinks = {
'issue': ('https://github.com/HDFGroup/h5pyd/issues/%s', 'GH'),
'pr': ('https://github.com/HDFGroup/h5pyd/pulls/%s', 'PR '),
'issue': ('https://github.com/h5py/h5pyd/issues/%s', 'GH%s'),
'pr': ('https://github.com/h5py/h5pyd/pull/%s', 'PR %s'),
}

# Add any paths that contain templates here, relative to this directory.
templates_path = ['_templates']

# The suffix of source filenames.
source_suffix = '.rst'

# The encoding of source files.
# source_encoding = 'utf-8-sig'
#source_encoding = 'utf-8-sig'

# The master toctree document.
master_doc = 'index'

# General information about the project.
project = 'h5pyd'
copyright = '2014 The HDF Group'
copyright = '2017, The HDF Group'

# The version info for the project you're documenting, acts as replacement for
# |version| and |release|, also used in various other places throughout the
# built documents.
#
# The full version, including alpha/beta/rc tags.
release = metadata.version('h5pyd')
release = '0.20.0'
# The short X.Y version.
version = '.'.join(release.split('.')[:2])

# The language for content autogenerated by Sphinx. Refer to documentation
# for a list of supported languages.
# language = None
#language = None

# There are two options for replacing |today|: either, you set today to some
# non-false value, then it is used:
# today = ''
#today = ''
# Else, today_fmt is used as the format for a strftime call.
# today_fmt = '%B %d, %Y'
#today_fmt = '%B %d, %Y'

# List of patterns, relative to source directory, that match files and
# directories to ignore when looking for source files.
exclude_patterns = ['_build']

# The reST default role (used for this markup: `text`) to use for all
# documents.
# default_role = None
#default_role = None

# If true, '()' will be appended to :func: etc. cross-reference text.
# add_function_parentheses = True
#add_function_parentheses = True

# If true, the current module name will be prepended to all description
# unit titles (such as .. function::).
# add_module_names = True
#add_module_names = True

# If true, sectionauthor and moduleauthor directives will be shown in the
# output. They are ignored by default.
# show_authors = False
#show_authors = False

# The name of the Pygments (syntax highlighting) style to use.
pygments_style = 'sphinx'

# A list of ignored prefixes for module index sorting.
# modindex_common_prefix = []
#modindex_common_prefix = []

# If true, keep warnings as "system message" paragraphs in the built documents.
# keep_warnings = False
#keep_warnings = False


# -- Options for HTML output ----------------------------------------------

# The theme to use for HTML and HTML Help pages. See the documentation for
# a list of builtin themes.
html_theme = 'furo'
html_theme = 'sphinx_rtd_theme'

# Theme options are theme-specific and customize the look and feel of a theme
# further. For a list of options available for each theme, see the
# documentation.
# html_theme_options = {}
#html_theme_options = {}

# Add any paths that contain custom themes here, relative to this directory.
# html_theme_path = []
#html_theme_path = []

# The name for this set of Sphinx documents. If None, it defaults to
# "<project> v<release> documentation".
# html_title = None
#html_title = None

# A shorter title for the navigation bar. Default is the same as html_title.
# html_short_title = None
#html_short_title = None

# The name of an image file (relative to this directory) to place at the top
# of the sidebar.
# html_logo = None
#html_logo = None

# The name of an image file (within the static path) to use as favicon of the
# docs. This file should be a Windows icon file (.ico) being 16x16 or 32x32
# pixels large.
# html_favicon = None
#html_favicon = None

# Add any paths that contain custom static files (such as style sheets) here,
# relative to this directory. They are copied after the builtin static files,
Expand All @@ -129,48 +142,127 @@
# Add any extra paths that contain custom files (such as robots.txt or
# .htaccess) here, relative to this directory. These files are copied
# directly to the root of the documentation.
# html_extra_path = []
#html_extra_path = []

# If not '', a 'Last updated on:' timestamp is inserted at every page bottom,
# using the given strftime format.
# html_last_updated_fmt = '%b %d, %Y'
#html_last_updated_fmt = '%b %d, %Y'

# If true, SmartyPants will be used to convert quotes and dashes to
# typographically correct entities.
# html_use_smartypants = True
#html_use_smartypants = True

# Custom sidebar templates, maps document names to template names.
# html_sidebars = {}
#html_sidebars = {}

# Additional templates that should be rendered to pages, maps page names to
# template names.
# html_additional_pages = {}
#html_additional_pages = {}

# If false, no module index is generated.
# html_domain_indices = True
#html_domain_indices = True

# If false, no index is generated.
# html_use_index = True
#html_use_index = True

# If true, the index is split into individual pages for each letter.
# html_split_index = False
#html_split_index = False

# If true, links to the reST sources are added to the pages.
# html_show_sourcelink = True
#html_show_sourcelink = True

# If true, "Created using Sphinx" is shown in the HTML footer. Default is True.
# html_show_sphinx = True
#html_show_sphinx = True

# If true, "(C) Copyright ..." is shown in the HTML footer. Default is True.
# html_show_copyright = True
#html_show_copyright = True

# If true, an OpenSearch description file will be output, and all pages will
# contain a <link> tag referring to it. The value of this option must be the
# base URL from which the finished HTML is served.
# html_use_opensearch = ''
#html_use_opensearch = ''

# This is the file name suffix for HTML files (e.g. ".xhtml").
# html_file_suffix = None
#html_file_suffix = None

# Output file base name for HTML help builder.
htmlhelp_basename = 'h5pyddoc'


# -- Options for LaTeX output ---------------------------------------------

latex_elements = {
# The paper size ('letterpaper' or 'a4paper').
#'papersize': 'letterpaper',

# The font size ('10pt', '11pt' or '12pt').
#'pointsize': '10pt',

# Additional stuff for the LaTeX preamble.
#'preamble': '',
}

# Grouping the document tree into LaTeX files. List of tuples
# (source start file, target name, title,
# author, documentclass [howto, manual, or own class]).
latex_documents = [
('index', 'h5pyd.tex', 'h5pyd Documentation',
'The HDF Group', 'manual'),
]

# The name of an image file (relative to this directory) to place at the top of
# the title page.
#latex_logo = None

# For "manual" documents, if this is true, then toplevel headings are parts,
# not chapters.
#latex_use_parts = False

# If true, show page references after internal links.
#latex_show_pagerefs = False

# If true, show URL addresses after external links.
#latex_show_urls = False

# Documents to append as an appendix to all manuals.
#latex_appendices = []

# If false, no module index is generated.
#latex_domain_indices = True


# -- Options for manual page output ---------------------------------------

# One entry per manual page. List of tuples
# (source start file, name, description, authors, manual section).
man_pages = [
('index', 'h5pyd', 'h5pyd Documentation',
['The HDF Group'], 1)
]

# If true, show URL addresses after external links.
#man_show_urls = False


# -- Options for Texinfo output -------------------------------------------

# Grouping the document tree into Texinfo files. List of tuples
# (source start file, target name, title, author,
# dir menu entry, description, category)
texinfo_documents = [
('index', 'h5pyd', 'h5pyd Documentation',
'The HDF Group', 'h5pyd', 'One line description of project.',
'Miscellaneous'),
]

# Documents to append as an appendix to all manuals.
#texinfo_appendices = []

# If false, no module index is generated.
#texinfo_domain_indices = True

# How to display URL addresses: 'footnote', 'no', or 'inline'.
#texinfo_show_urls = 'footnote'

# If true, do not generate a @detailmenu in the "Top" node's menu.
#texinfo_no_detailmenu = False
47 changes: 0 additions & 47 deletions docs/config.rst
Original file line number Diff line number Diff line change
Expand Up @@ -27,50 +27,3 @@ attributes:
particular container by specifying ``track_order`` argument to
:class:`h5py.File`, :meth:`h5py.Group.create_group`,
:meth:`h5py.Group.create_dataset`. The default is ``False``.


IPython
-------

H5py ships with a custom ipython completer, which provides object introspection
and tab completion for h5py objects in an ipython session. For example, if a
file contains 3 groups, "foo", "bar", and "baz"::

In [4]: f['b<TAB>
bar baz

In [4]: f['f<TAB>
# Completes to:
In [4]: f['foo'

In [4]: f['foo'].<TAB>
f['foo'].attrs f['foo'].items f['foo'].ref
f['foo'].copy f['foo'].iteritems f['foo'].require_dataset
f['foo'].create_dataset f['foo'].iterkeys f['foo'].require_group
f['foo'].create_group f['foo'].itervalues f['foo'].values
f['foo'].file f['foo'].keys f['foo'].visit
f['foo'].get f['foo'].name f['foo'].visititems
f['foo'].id f['foo'].parent

The easiest way to enable the custom completer is to do the following in an
IPython session::

In [1]: import h5py

In [2]: h5py.enable_ipython_completer()

It is also possible to configure IPython to enable the completer every time you
start a new session. For >=ipython-0.11, "h5py.ipy_completer" just needs to be
added to the list of extensions in your ipython config file, for example
:file:`~/.config/ipython/profile_default/ipython_config.py` (if this file does
not exist, you can create it by invoking `ipython profile create`)::

c = get_config()
c.InteractiveShellApp.extensions = ['h5py.ipy_completer']

For <ipython-0.11, the completer can be enabled by adding the following lines
to the :func:`main` in :file:`.ipython/ipy_user_conf.py`::

def main():
ip.ex('from h5py import ipy_completer')
ip.ex('ipy_completer.load_ipython_extension()')
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