Automated linkml linter run #898
Merged
Conversation
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
…nto automated-linkml-linting
Add automatic LinkML linting of schema on each PR changing schema
|
Hrm so it triggered https://github.com/GenomicsStandardsConsortium/mixs/actions/runs/13112707250 But failed first time because of the |
jfy133
reviewed
Feb 3, 2025
|
OK it looks like it's only pulling the original job code (with the |
|
Happy to have this merged into the |
|
Feel free to drop an approval if you think this looks good, and merge it in. We can open a new PR to see the Action in the works after. |
jfy133
approved these changes
Feb 3, 2025
|
OK, approved @sujaypatil96 you can merge it in. Then we need to find a minor change (e.g. typo fix) to make and open a PR with that to test it (or we just a dummy PR with a change, but we don't merge in) |
LinkML Linting Resultslinkml, version 1.8.4 linting found the following issues. For more information about the linting rule categories, see the LinkML linter documentation. Summary
Problems per SchemaFile: /home/runner/work/mixs/mixs/src/mixs/schema/mixs.yaml Warning
|
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.
This is the same PR from @jfy133 as #896 but instead the PR is now being merged into
mainas base. It essentially adds a GitHub Action that creates a linkml linter run report and dumps the results of the report run as a comment on a PR, if the PR modifies the mainmixs.yamlsource schema.