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Add a Rust implementation for 1d Gaussian exponential family state nodes #229

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Oct 29, 2024
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182 changes: 182 additions & 0 deletions .github/workflows/ci.yml
Original file line number Diff line number Diff line change
@@ -0,0 +1,182 @@
# This file is autogenerated by maturin v1.7.4
# To update, run
#
# maturin generate-ci github
#

name: CI

on:
push:
branches:
- main
- master
tags:
- '*'
pull_request:
workflow_dispatch:

permissions:
contents: read

jobs:
linux:
runs-on: ${{ matrix.platform.runner }}
strategy:
matrix:
platform:
- runner: ubuntu-latest
target: x86_64
- runner: ubuntu-latest
target: x86
- runner: ubuntu-latest
target: aarch64
- runner: ubuntu-latest
target: armv7
- runner: ubuntu-latest
target: s390x
- runner: ubuntu-latest
target: ppc64le
steps:
- uses: actions/checkout@v4
- uses: actions/setup-python@v5
with:
python-version: 3.x
- name: Build wheels
uses: PyO3/maturin-action@v1
with:
target: ${{ matrix.platform.target }}
args: --release --out dist --find-interpreter
sccache: 'true'
manylinux: auto
- name: Upload wheels
uses: actions/upload-artifact@v4
with:
name: wheels-linux-${{ matrix.platform.target }}
path: dist

musllinux:
runs-on: ${{ matrix.platform.runner }}
strategy:
matrix:
platform:
- runner: ubuntu-latest
target: x86_64
- runner: ubuntu-latest
target: x86
- runner: ubuntu-latest
target: aarch64
- runner: ubuntu-latest
target: armv7
steps:
- uses: actions/checkout@v4
- uses: actions/setup-python@v5
with:
python-version: 3.x
- name: Build wheels
uses: PyO3/maturin-action@v1
with:
target: ${{ matrix.platform.target }}
args: --release --out dist --find-interpreter
sccache: 'true'
manylinux: musllinux_1_2
- name: Upload wheels
uses: actions/upload-artifact@v4
with:
name: wheels-musllinux-${{ matrix.platform.target }}
path: dist

windows:
runs-on: ${{ matrix.platform.runner }}
strategy:
matrix:
platform:
- runner: windows-latest
target: x64
- runner: windows-latest
target: x86
steps:
- uses: actions/checkout@v4
- uses: actions/setup-python@v5
with:
python-version: 3.x
architecture: ${{ matrix.platform.target }}
- name: Build wheels
uses: PyO3/maturin-action@v1
with:
target: ${{ matrix.platform.target }}
args: --release --out dist --find-interpreter
sccache: 'true'
- name: Upload wheels
uses: actions/upload-artifact@v4
with:
name: wheels-windows-${{ matrix.platform.target }}
path: dist

macos:
runs-on: ${{ matrix.platform.runner }}
strategy:
matrix:
platform:
- runner: macos-12
target: x86_64
- runner: macos-14
target: aarch64
steps:
- uses: actions/checkout@v4
- uses: actions/setup-python@v5
with:
python-version: 3.x
- name: Build wheels
uses: PyO3/maturin-action@v1
with:
target: ${{ matrix.platform.target }}
args: --release --out dist --find-interpreter
sccache: 'true'
- name: Upload wheels
uses: actions/upload-artifact@v4
with:
name: wheels-macos-${{ matrix.platform.target }}
path: dist

sdist:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v4
- name: Build sdist
uses: PyO3/maturin-action@v1
with:
command: sdist
args: --out dist
- name: Upload sdist
uses: actions/upload-artifact@v4
with:
name: wheels-sdist
path: dist

release:
name: Release
runs-on: ubuntu-latest
if: ${{ startsWith(github.ref, 'refs/tags/') || github.event_name == 'workflow_dispatch' }}
needs: [linux, musllinux, windows, macos, sdist]
permissions:
# Use to sign the release artifacts
id-token: write
# Used to upload release artifacts
contents: write
# Used to generate artifact attestation
attestations: write
steps:
- uses: actions/download-artifact@v4
- name: Generate artifact attestation
uses: actions/attest-build-provenance@v1
with:
subject-path: 'wheels-*/*'
- name: Publish to PyPI
if: "startsWith(github.ref, 'refs/tags/')"
uses: PyO3/maturin-action@v1
env:
MATURIN_PYPI_TOKEN: ${{ secrets.PYPI_API_TOKEN }}
with:
command: upload
args: --non-interactive --skip-existing wheels-*/*
6 changes: 6 additions & 0 deletions .github/workflows/pypi.yml
Original file line number Diff line number Diff line change
Expand Up @@ -18,6 +18,12 @@ jobs:
curl -sSL https://install.python-poetry.org | python3 -
echo "$HOME/.local/bin" >> $GITHUB_PATH
poetry self add "poetry-dynamic-versioning[plugin]"
- name: Install the package
run: |
poetry install --with dev
- name: Build wheels
run: |
poetry run maturin build --release
- name: Build a binary wheel and a source tarball
run: >-
poetry build
Expand Down
23 changes: 23 additions & 0 deletions .github/workflows/test-rs.yml
Original file line number Diff line number Diff line change
@@ -0,0 +1,23 @@
name: Rust Crate CI

on:
release:
types: [published]
pull_request:
types: [opened, synchronize, reopened]

jobs:
test:
runs-on: ubuntu-latest

steps:
- name: Checkout repository
uses: actions/checkout@v3

- name: Install Rust
uses: actions-rs/toolchain@v1
with:
toolchain: stable

- name: Run tests
run: cargo test
17 changes: 14 additions & 3 deletions .github/workflows/test.yml
Original file line number Diff line number Diff line change
Expand Up @@ -37,18 +37,29 @@ jobs:
# Step 4: Install System Dependencies
- name: Install Graphviz
run: sudo apt-get install -y graphviz

# Step 5: Install Rust
- name: Install Rust
uses: actions-rs/toolchain@v1
with:
toolchain: stable
profile: minimal

# Step 5: Install Python Dependencies using Poetry
# Step 6: Install Python Dependencies using Poetry
- name: Install dependencies
run: |
poetry install --with dev
# Step 7: Install the Rust package
- name: Build and Install the Package
run: poetry run maturin develop

# Step 6: Run Tests and Generate Coverage Report
# Step 8: Run Tests and Generate Coverage Report
- name: Run tests and coverage
run: |
poetry run pytest ./tests/ --cov=./src/pyhgf/ --cov-report=xml
# Step 7: Upload Coverage Report to Codecov
# Step 9: Upload Coverage Report to Codecov
- name: Upload coverage to Codecov
uses: codecov/codecov-action@v4
with:
Expand Down
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