update docs

COMBINE-lab · Feb 12, 2024 · edadb1a · edadb1a
1 parent 14296c9
commit edadb1a
Show file tree

Hide file tree

Showing 2 changed files with 2 additions and 2 deletions.
diff --git a/docs/source/conf.py b/docs/source/conf.py
@@ -22,7 +22,7 @@
 author = "Dongze He, Rob Patro"
 
 # The full version, including alpha/beta/rc tags
-release = "0.8.1"
+release = "0.10.0"
 
 master_doc = "index"
 

diff --git a/docs/source/index.rst b/docs/source/index.rst
@@ -4,7 +4,7 @@ Welcome to the documentation for pyroe
 What is pyroe?
 ===================
 
-The pyroe package provides useful functions for analyzing single-cell or single-nucleus RNA-sequencing data using `alevin-fry`.
+The pyroe package provides useful functions for analyzing single-cell or single-nucleus RNA-sequencing data using `alevin-fry`. Since `simpleaf` version 0.14.0, `roers <https://github.com/COMBINE-lab/roers>`_, instead of pyroe, became as the default augmented reference constructor for `alevin-fry` and `simpleaf`. Now, the main purpose of `pyroe` is to provide the function `load_fry` to load `alevin-fry` quantification results into Python as an `anndata <http://anndata.readthedocs.io/>`_ object, so as to be compatible with `scanpy <https://scanpy.readthedocs.io/en/stable/index.html>`_.
 
 .. toctree::
    :maxdepth: 2