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remove batch variables from GHA tests
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borauyar committed Jul 19, 2024
1 parent fa24a7c commit dbd8c6c
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion .github/workflows/benchmarks.yml
Original file line number Diff line number Diff line change
Expand Up @@ -75,7 +75,7 @@ jobs:
shell: bash -l {0}
run: |
conda activate my_env
flexynesis --data_path dataset1 --model_class DirectPred --target_variables Erlotinib --batch_variables Crizotinib --fusion_type early --hpo_iter 1 --features_min 50 --features_top_percentile 5 --log_transform False --data_types gex,cnv --outdir . --prefix erlotinib_direct --early_stop_patience 3 --use_loss_weighting False
flexynesis --data_path dataset1 --model_class DirectPred --target_variables Erlotinib --fusion_type early --hpo_iter 1 --features_min 50 --features_top_percentile 5 --log_transform False --data_types gex,cnv --outdir . --prefix erlotinib_direct --early_stop_patience 3 --use_loss_weighting False
- name: Run DirectPred_TestSurvival
shell: bash -l {0}
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