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added nlight
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rachelstephlee committed Sep 20, 2024
1 parent c89e5b1 commit 19eadb6
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion code/util/fetch_data_docDB.py
Original file line number Diff line number Diff line change
Expand Up @@ -71,7 +71,7 @@ def get_viruses(injections):
if injections:
virus_names = [inj['injection_materials'][0] for inj in injections if inj['injection_materials']]

NM_patterns = {"DA": "DA|dLight", "NE":"NE|NA", "Ach":"Ach", "5HT":"5HT", "GCaMP":"GCaMP"}
NM_patterns = {"DA": "DA|dLight", "NE":"NE|NA|nLight", "Ach":"Ach", "5HT":"5HT", "GCaMP":"GCaMP"}
for inj in injections:
for NM, NM_names_in_virus in NM_patterns.items():
if inj['injection_materials'] and re.search(NM_names_in_virus, inj['injection_materials'][0]):
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