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aind-fib-qc-raw (ver 0.1)

QC capsule for fiber photometry (fib) raw data acquired with HARP/Bonsai-based behavior (e.g. Dynamic Foraging)

run_capsule.py : main script run_capsule_dev.py : for develipment, in VScode + jupyter-extension env.


1.reading rawdata

2.generating figures and metrics

3.submitting figures to kachery to obtain unique url

4.Composing QC

5.Pushing QC to DocDB

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  • Python 96.3%
  • Dockerfile 3.1%
  • Shell 0.6%