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ASBecker committed Oct 8, 2020
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13 changes: 5 additions & 8 deletions README.md
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# Paper Repository: Brown Fat Does Not Cause Cachexia in Cancer Patients
# Paper Repository: Brown Fat Does Not Cause Cachexia in Cancer Patients <img src="Presentation/hex_batcanc.png" align="right" alt="" width="120" />

<!-- badges: start -->
[![Launch Rstudio Binder](http://mybinder.org/badge_logo.svg)](https://mybinder.org/v2/gh/ASBecker/BATcancer/master?urlpath=rstudio)
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> 5. Division of Controlling and Data Management, UniversityHospital Zurich

This paper has been submitted for publication in *PLOS ONE* and is available on bioRxiv.
This paper has been published in [PLOS ONE](https://doi.org/10.1371/journal.pone.0239990).

> In this large retrospective longitudinal cohort study, we examined whether brown adipose tissue (BAT)
> has a role in cancer cachexia. We found that there is no association between Cancer, BAT and weight loss.
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## Software implementation

The analysis was run in R 4.0.0. We also recommend using the latest version of RStudio.
The analysis was run in R 4.0.2. We also recommend using the latest version of RStudio.


## Getting the code
Expand All @@ -87,8 +87,8 @@ Knitting `Presentation/R_notebook.Rmd` will yield a html file containing the mai
of the analysis, running the chunks in RStudio allows for access to the data and additional
inspection/analysis.

Alternatively, you can click on the [Binder badge](https://mybinder.org/v2/gh/ASBecker/BATcancer/master?urlpath=rstudio)
at the top of this page and run the analysis in an online instance of RStudio server.
Alternatively, you can run the analysis on [Binder](https://mybinder.org/v2/gh/ASBecker/BATcancer/master?urlpath=rstudio)
in an online instance of RStudio server.
This analysis is powered by the [holepunch package](https://github.com/karthik/holepunch).


Expand All @@ -97,6 +97,3 @@ This analysis is powered by the [holepunch package](https://github.com/karthik/h
All source code is made available under a BSD 3-clause license. You can freely
use and modify the code, without warranty, so long as you provide attribution
to the authors. See `LICENSE.md` for the full license text.

The manuscript text is currently under review for publication in the journal
PLOS ONE.

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