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small-code.md

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Small code folder

File convert

Qe_deepmd

Read in prefix=filename qe output and output deepmd .raw files

  • options

./qe_deepmd.x filename

Ipi_qe

Read in Ipi output file pos.xyz write to qe format .pos and .cel file

  • options

./ipi_qe.x -p output_prefix -n input_name -t time_step -angs -f

Read properties

Qe_volume

Read volume and density in QE output .cel write to given filename

  • options

./qe_volume.x -n input_name -o output_name -m mass_of_system -angs -f

Ipi_temperature

Read temperature in ipi data.out and write temperature and average to given filename

  • options

./ipi_temperature.x -n input_name -o output_name -c temperature_col -t time_col -s step_col

select_thd

Read in temperature.txt, average_hbonds.txt and volume.txt and write the deviation from average to given filename

  • options

./select_thd.x -t temperature_name -h hbond_name -d density_name -o output_name