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Releases: veg/hyphy

2.5.12

30 Apr 14:07
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Several important optimizer fixes and improvements.
Fixes for HMM models.
Add HMM option in SRV to BUSTED[S]

2.5.11

27 Apr 11:25
f553a83
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Bug fixes and speed improvements.

2.5.10

23 Apr 15:45
82a171b
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Bug fix (soft errors) where automatically renamed sequence names would not be reflected in the corresponding topology

2.5.9

21 Apr 12:00
466f29f
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Bug fixes and improvements
added MH support for aBSREL
added state imputation for PRIME
zero-branch length squashing for standard selection analyses

2.5.8

24 Mar 23:22
933d4f4
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Adding PRIME, minor enchacements

2.5.7

19 Mar 03:11
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-- Fixing pesky optimizer boundary cases
-- Fixing a serious memory bloat issue in MPI-enabled analyses, esp GARD
-- Basic Iterators in HBL
-- Improvements to some optimization settings

2.5.6

14 Mar 13:01
a1b28dd
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Better testing, fixes for bugs in MEME and RELAX in 2.5.5

2.5.5

29 Feb 16:11
0e4c12a
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THIS RELEASE IS BUGGY

Do not use for MEME AND RELAX analyses.

2.5.4

20 Feb 15:22
5228300
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GARD fixes.

2.5.3

16 Feb 00:30
e86b950
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GARD issue hot fix, prevent crash that could occur during error handling