From 1e9377a9ac5f296875ab93f6d948d1e2ca44f149 Mon Sep 17 00:00:00 2001
From: Josephat Mwakyusa <josephatjulius24@gmail.com>
Date: Thu, 19 Dec 2024 11:21:21 +0300
Subject: [PATCH] Add support accommodate lab observation codes

---
 scripts/create-queries.js | 8 +++++++-
 1 file changed, 7 insertions(+), 1 deletion(-)

diff --git a/scripts/create-queries.js b/scripts/create-queries.js
index 58594e7..630bdd3 100644
--- a/scripts/create-queries.js
+++ b/scripts/create-queries.js
@@ -147,7 +147,6 @@ async function processMappings(datastoreKeyData) {
           return mappingItem.code;
         });
       }
-
       query += ` FROM encounter_flat en \n`;
 
       // Be careful when choosing right vs left join
@@ -160,6 +159,13 @@ async function processMappings(datastoreKeyData) {
         query += `AND drep.code IN ('${loincOrderCodes.join("','")}') \n`;
       }
 
+      if (loincObsCodes.length > 0) {
+        query += ` RIGHT JOIN observation_flat obs ON obs.encounter_id = en.encounter_id \n`;
+        query += `AND obs.val_concept_code IN ('${loincObsCodes.join(
+          "','"
+        )}') \n`;
+      }
+
       query += `LEFT JOIN patient_flat pt ON pt.id = en.patient_id \n `;
 
       query +=