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[Proposal] Replace samplingType and observationType with sdo:additionalType #223

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ashleysommer opened this issue Jun 12, 2024 · 2 comments · May be fixed by #224
Open

[Proposal] Replace samplingType and observationType with sdo:additionalType #223

ashleysommer opened this issue Jun 12, 2024 · 2 comments · May be fixed by #224
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modelling related Related to Modelling extension, update, imporvements

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@ashleysommer
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My understanding is samplingType andobservationType were included in the TERN ontology to allow a kind of soft-typing mechanism, using more specific types from a vocabulary rather than adding new SubClasses to the TERN ontology.

There popular and increasing use of sdo:additionalType from schema.org that does the same thing, it is becoming the de-facto standard way of soft-typing across many data models.

The predicates samplingType and observationType in TERN ontology are not widely used, I don't know of any real world published datasets that use them. Most simply use/(abuse?) usedProcedure to classify different kinds of Samplings and Observations.

I propose to remove samplingType and observationType from TERN ontology and replace them with sdo:additionalType.

Aside, this would be a good opportunity to remove dcterms:type profiling from the TERN ontology if it was an implementation detail and wasn't supposed to be in the published ontology.

@ashleysommer
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There remains a question about the use of sdo:additionalType on a tern:Sample.
Sample is a kind of a FeatureOfInterest, and TERN ontology uses tern:featureType to soft-type Features.
The correct thing to do here would be also replace featureType with sdo:additionalType, however tern:featureType is extensively used, and is hard to move away from.

@smguru
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smguru commented Jun 12, 2024

Yes can be removed, I don't think we are using both properties. FYi @javiersan18 @junrongYu

@smguru smguru added the modelling related Related to Modelling extension, update, imporvements label Aug 27, 2024
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