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I encountered the issue in the headline. I was able to produce correct p-values using psych::corr.test. My first quess is that denominator is n which is taken from dimension of the matrix but not as number of pairs which were acceptable due to missing values.
The text was updated successfully, but these errors were encountered:
My problem as well. I can't find any spesification of test statistics underlying cor.mtest (pearson, spearman etc.) and missing-method (pairwise complete obs vs complete obs) so I can't trust corrplot to produce correct p-values for the correlation matrix coefficients. Will try the psych corr.test, but hope that mtest can function with more detail!
Hello,
I encountered the issue in the headline. I was able to produce correct p-values using psych::corr.test. My first quess is that denominator is n which is taken from dimension of the matrix but not as number of pairs which were acceptable due to missing values.
The text was updated successfully, but these errors were encountered: