Update Session 5 - NEMD

[summeraz]

In this session we will use the SLLOD equations of motion to estimate the shear viscosity of linear alkanes.

• Revisit the alkane box class we've used in earlier sessions
  • Could even use the alkane/water mixture class so that the students examine the shear viscosity of mixtures on their own time later, but for this session we'll just look at a pure alkane system
• Walk through the LAMMPS script
• Explain the SLLOD equations of motion
• Run the LAMMPS simulations
  • These will likely take too long, so data will be provided
• View trajectories
• Calculate shear viscosity