.travis.yml

language: python
sudo: required
dist: xenial

python:
    - "3.6"
    - "3.7"

before_install:
    - echo $PATH
    - deactivate
    - echo $PATH
    - if [[ "$TRAVIS_PYTHON_VERSION" == "2.7" ]]; then
        wget https://repo.continuum.io/miniconda/Miniconda2-latest-Linux-x86_64.sh -O miniconda.sh;
      else
        wget https://repo.continuum.io/miniconda/Miniconda3-latest-Linux-x86_64.sh -O miniconda.sh;
      fi
    - bash miniconda.sh -b -p $HOME/miniconda
    - export PATH="$HOME/miniconda/bin:$PATH"
    - hash -r
    - conda config --set always_yes yes --set changeps1 no
    - conda update -q conda
    # Useful for debugging any issues with conda
    - conda info -a
    - echo $PATH


install:
    - conda create -q -n test-environment python=$TRAVIS_PYTHON_VERSION pip numpy matplotlib pytables numba nbconvert ipykernel pytest pandas pyyaml
    - source activate test-environment
    - if [[ $TRAVIS_PYTHON_VERSION == '2.7' ]]; then pip install pathlib ; fi
    - python setup.py build
    - pip install .

before_script:
    - cd notebooks/data
    - wget https://ndownloader.figshare.com/files/3350666 -O dsdna_d7d17_50_50_1.set
    - wget https://ndownloader.figshare.com/files/3350669 -O dsdna_d7d17_50_50_1.spc
    - wget https://ndownloader.figshare.com/files/3350672 -O Pre.ht3
    - wget https://ndownloader.figshare.com/files/3350663 -O 0023uLRpitc_NTP_20dT_0.5GndCl.sm
    - wget https://github.com/Photon-HDF5/phconvert/files/231343/Cy3.Cy5_diff_PIE-FRET.ptu.zip
    - unzip Cy3.Cy5_diff_PIE-FRET.ptu.zip
    - wget https://ndownloader.figshare.com/files/6955091 -O 161128_DM1_50pM_pH74.ptu
    - wget https://www.dropbox.com/s/s8zzxcq7d2nfqe0/20161027_DM1_1nM_pH7_20MHz1.ptu.zip
    - unzip 20161027_DM1_1nM_pH7_20MHz1.ptu.zip
    - wget https://ndownloader.figshare.com/files/13675271 -O TestFile_2.ptu
    - wget https://github.com/dwaithe/FCS_point_correlator/raw/master/focuspoint/topfluorPE_2_1_1_1.pt3
    - wget https://github.com/Photon-HDF5/phconvert/files/1380341/DNA_FRET_0.5nM.pt3.zip
    - unzip DNA_FRET_0.5nM.pt3.zip
    - wget https://github.com/Photon-HDF5/phconvert/files/1336330/data.zip
    - unzip data.zip

script:
    - cd ../..
    - pwd
    - py.test -v
    - cd notebooks
    - python $TRAVIS_BUILD_DIR/tests/nbrun.py

sudo: false