ilmn-dragen-1kgp.yaml

Name: "1000 Genomes Phase 3 Reanalysis with DRAGEN 3.5"
Description: This dataset contains alignment files and short nucleotide, copy number, and structural variant call files from the newly revised (n=3202) 1000 Genomes Project Phase 3 using Illumina DRAGEN v3.5.7b
Contact: "[Illumina, Inc.](mailto:support@illumina.com)"
Documentation: "[DRAGEN Support Resources](https://support.illumina.com/sequencing/sequencing_software/dragen-bio-it-platform.html)"
ManagedBy: "[Illumina, Inc.](https://www.illumina.com/products/by-type/informatics-products/dragen-bio-it-platform.html)"
UpdateFrequency: Files may be updated subsequent to changes to the 1000 Genomes Project.
Tags:
  - aws-pds
  - life sciences
  - health
  - biology
  - genetic
  - genomic
  - bam
  - vcf
License: "TBD"
Resources:
  - Description: BAM, SNV-vcf, SNV-gvcf, STR-vcf, STR-bam, SV-vcf, ROH-vcf, CNV-vcf, CNV-bw files in a public S3 bucket. 
    ARN: arn:aws:s3:::1000genomes-dragen
    Region: us-west-2
    Type: S3 Bucket
DataAtWork:
  Tutorials:
    - Title: "DRAGEN Quick Start on AWS"
      URL: https://github.com/aws-quickstart/quickstart-illumina-dragen
      AuthorName: AWS Quick Start Team
      AuthorURL: https://github.com/aws-quickstart
  Tools & Applications:
    - Title: "DRAGEN on BaseSpace Sequence Hub"
      URL: https://www.illumina.com/products/by-type/informatics-products/basespace-sequence-hub.html#key-features
      AuthorName: Illumina Inc.
      AuthorURL: https://www.illumina.com/
    - Title: "DRAGEN 3.7.5b Release"
      URL: https://support.illumina.com/content/dam/illumina-support/documents/downloads/software/dragen/DRAGEN-3.5.7b-Customer-Release-Notes-1000000131537-00.pdf
      AuthorName: Illumina Inc.
      AuthorURL: https://www.illumina.com/
  Publications:
    - Title: "precisionFDA Truth Challenge V2: Calling variants from short- and long-reads in difficult-to-map regions (Preprint)"
      URL: https://www.biorxiv.org/content/10.1101/2020.11.13.380741v1
      AuthorName: Olson et al (2020)