NeuroGraphDataset BadZipFile

[PascalIversen]

Hello PyG team!
I think the download of the NeuroGraphDataset doesn't work anymore:

from torch_geometric.datasets import NeuroGraphDataset
import torch_geometric
print(torch_geometric.__version__)
dataset = NeuroGraphDataset(root='data/', name='HCPTask', transform=None)

Error:

{
	"name": "BadZipFile",
	"message": "File is not a zip file",
	"stack": "---------------------------------------------------------------------------
BadZipFile                                Traceback (most recent call last)
File \"<user_code>\", line 5, in <module>
    dataset = NeuroGraphDataset(root='<data_directory>', name='<dataset_name>', transform=None)

File \"<library_path>/torch_geometric/datasets/neurograph.py\", line 80, in __init__
    super().__init__(root, transform, pre_transform, pre_filter, force_reload=force_reload)
    self.load(self.processed_paths[0])

File \"<library_path>/torch_geometric/data/in_memory_dataset.py\", line 81, in __init__
    super().__init__(root, transform, pre_transform, pre_filter, log, force_reload)

File \"<library_path>/torch_geometric/data/dataset.py\", line 112, in __init__
    self._download()

File \"<library_path>/torch_geometric/data/dataset.py\", line 229, in _download
    self.download()

File \"<library_path>/torch_geometric/datasets/neurograph.py\", line 103, in download
    extract_zip(path, self.raw_dir)

File \"<library_path>/torch_geometric/data/extract.py\", line 44, in extract_zip
    with zipfile.ZipFile(path, 'r') as f:
        f.extractall(folder)

File \"<python_standard_library>/zipfile.py\", line 1302, in __init__
    self._RealGetContents()

File \"<python_standard_library>/zipfile.py\", line 1369, in _RealGetContents
    raise BadZipFile(\"File is not a zip file\")

BadZipFile: File is not a zip file"
}

Versions

% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
100 24353 100 24353 0 0 81492 0 --:--:-- --:--:-- --:--:-- 81721
Collecting environment information...
PyTorch version: 2.1.2
Is debug build: False
CUDA used to build PyTorch: None
ROCM used to build PyTorch: N/A

OS: macOS 14.7.1 (arm64)
GCC version: Could not collect
Clang version: 16.0.0 (clang-1600.0.26.4)
CMake version: Could not collect
Libc version: N/A

Python version: 3.11.5 | packaged by conda-forge | (main, Aug 27 2023, 03:33:12) [Clang 15.0.7 ] (64-bit runtime)
Python platform: macOS-14.7.1-arm64-arm-64bit
Is CUDA available: False
CUDA runtime version: No CUDA
CUDA_MODULE_LOADING set to: N/A
GPU models and configuration: No CUDA
Nvidia driver version: No CUDA
cuDNN version: No CUDA
HIP runtime version: N/A
MIOpen runtime version: N/A
Is XNNPACK available: True

CPU:
Apple M3 Pro

Versions of relevant libraries:
[pip3] numpy==1.26.2
[pip3] pytorch-lightning==2.1.3
[pip3] torch==2.1.2
[pip3] torch-geometric==2.6.1
[pip3] torchaudio==2.1.2
[pip3] torchmetrics==1.2.1
[pip3] torchvision==0.16.2
[conda] captum 0.7.0 0 pytorch
[conda] numpy 1.26.2 py311he598dae_0
[conda] numpy-base 1.26.2 py311hfbfe69c_0
[conda] pytorch 2.1.2 py3.11_0 pytorch
[conda] pytorch-lightning 2.1.3 pyhd8ed1ab_0 conda-forge
[conda] pytorch-mutex 1.0 cuda pytorch
[conda] torch-geometric 2.6.1 pypi_0 pypi
[conda] torchaudio 2.1.2 py311_cpu pytorch
[conda] torchmetrics 1.2.1 pyhd8ed1ab_0 conda-forge
[conda] torchvision 0.16.2 py311_cpu pytorch

[akihironitta]

@PascalIversen Can you try removing the data and re-download the dataset? I wasn't able to reproduce this issue.